RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 ZEB2O60315 1214 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 GRK4P32298 578 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 PRMT2P55345 433 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 KCNH2Q12809 1159 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 ZNF569Q5MCW4 686 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 TCERG1LQ5VWI1 586 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 CCDC170Q8IYT3 715 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 C7orf31Q8N865 590 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 SAAL1Q96ER3 474 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 MTG1Q9BT17 334 aaPredicted RBP16.31■□□□□ 0.2
CALD1-206ENST00000424922 TARS2Q9BW92 718 aaKnown RBP16.31■□□□□ 0.2
CALD1-206ENST00000424922 ARGLU1Q9NWB6 273 aaPredicted RBP16.31■□□□□ 0.2
CALD1-206ENST00000424922 RNF216Q9NWF9 866 aaPredicted RBP16.31■□□□□ 0.2
CALD1-206ENST00000424922 ZNHIT6Q9NWK9 470 aaKnown RBP16.31■□□□□ 0.2
CALD1-206ENST00000424922 FAM53CQ9NYF3 392 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 HDAC6Q9UBN7 1215 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 DDX20Q9UHI6 824 aaKnown RBP16.31■□□□□ 0.2
CALD1-206ENST00000424922 CDC23Q9UJX2 597 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 PTCH2Q9Y6C5 1203 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 CTAGE9A4FU28 777 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 MSCO60682 206 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 TRIM21P19474 475 aaKnown RBP16.31■□□□□ 0.2
CALD1-206ENST00000424922 KLK7P49862 253 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 PTENP60484 403 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 NKX3-2P78367 333 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 KRT83P78385 493 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 ZNF200P98182 395 aaPredicted RBP16.31■□□□□ 0.2
CALD1-206ENST00000424922 MAPK6Q16659 721 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 GPR161Q8N6U8 529 aaKnown RBP16.31■□□□□ 0.2
CALD1-206ENST00000424922 PCMTD1Q96MG8 357 aaPredicted RBP16.31■□□□□ 0.2
CALD1-206ENST00000424922 IRX2Q9BZI1 471 aaPredicted RBP16.31■□□□□ 0.2
CALD1-206ENST00000424922 FAM49AQ9H0Q0 323 aaPredicted RBP16.31■□□□□ 0.2
CALD1-206ENST00000424922 HAUS4Q9H6D7 363 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 IFT122Q9HBG6 1241 aa16.31■□□□□ 0.2
CALD1-206ENST00000424922 A0A087WZ62 844 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 A0A0U1RQJ8 604 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 MBLAC1A4D2B0 266 aaPredicted RBP16.3■□□□□ 0.2
CALD1-206ENST00000424922 TTLL13PA6NNM8 815 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 INO80B-WBP1J3KQ70 363 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 PIGRP01833 764 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 PRKCBP05771 671 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 HNRNPH3P31942 346 aaKnown RBP16.3■□□□□ 0.2
CALD1-206ENST00000424922 CYLC1P35663 651 aaPredicted RBP16.3■□□□□ 0.2
CALD1-206ENST00000424922 KCNA10Q16322 511 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 CEP112Q8N8E3 955 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 ATRIPQ8WXE1 791 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 RABGGTAQ92696 567 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 SLC35C1Q96A29 364 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 ZBTB45Q96K62 511 aaPredicted RBP16.3■□□□□ 0.2
CALD1-206ENST00000424922 ARID3AQ99856 593 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 FDXACB1Q9BRP7 624 aaPredicted RBP16.3■□□□□ 0.2
CALD1-206ENST00000424922 INO80BQ9C086 356 aaPredicted RBP16.3■□□□□ 0.2
CALD1-206ENST00000424922 MINDY3Q9H8M7 445 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 REXO2Q9Y3B8 237 aaKnown RBP16.3■□□□□ 0.2
CALD1-206ENST00000424922 C17orf102A2RUQ5 167 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 TREHO43280 583 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 ASGR1P07306 291 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 CYP2C9P11712 490 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 GARTP22102 1010 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 PHKA2P46019 1235 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 C1QTNF8P60827 252 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 ADAM17P78536 824 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 RUFY4Q6ZNE9 571 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 KLHDC9Q8NEP7 349 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 NLRP7Q8WX94 980 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 SCLT1Q96NL6 688 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 MRPL4Q9BYD3 311 aaKnown RBP16.3■□□□□ 0.2
CALD1-206ENST00000424922 ANKFY1Q9P2R3 1169 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 SIK3Q9Y2K2 1263 aa16.3■□□□□ 0.2
CALD1-206ENST00000424922 TULP1O00294 542 aaPredicted RBP16.29■□□□□ 0.2
CALD1-206ENST00000424922 CSDE1O75534 798 aaKnown RBP16.29■□□□□ 0.2
CALD1-206ENST00000424922 AFPP02771 609 aaKnown RBP16.29■□□□□ 0.2
CALD1-206ENST00000424922 MATR3P43243 847 aaKnown RBP eCLIP16.29■□□□□ 0.2
CALD1-206ENST00000424922 NLRP11P59045 1033 aaKnown RBP16.29■□□□□ 0.2
CALD1-206ENST00000424922 MBTD1Q05BQ5 628 aa16.29■□□□□ 0.2
CALD1-206ENST00000424922 POU5F1BQ06416 359 aa16.29■□□□□ 0.2
CALD1-206ENST00000424922 TMEM62Q0P6H9 643 aa16.29■□□□□ 0.2
CALD1-206ENST00000424922 BFSP1Q12934 665 aa16.29■□□□□ 0.2
CALD1-206ENST00000424922 SNRNP35Q16560 246 aaKnown RBP16.29■□□□□ 0.2
CALD1-206ENST00000424922 NBPF20Q3BBV1 942 aa16.29■□□□□ 0.2
CALD1-206ENST00000424922 SRGAP1Q7Z6B7 1085 aa16.29■□□□□ 0.2
CALD1-206ENST00000424922 CBWD2Q8IUF1 395 aa16.29■□□□□ 0.2
CALD1-206ENST00000424922 SLC35F6Q8N357 371 aa16.29■□□□□ 0.2
CALD1-206ENST00000424922 GOLGA1Q92805 767 aa16.29■□□□□ 0.2
CALD1-206ENST00000424922 NAPGQ99747 312 aaPredicted RBP16.29■□□□□ 0.2
CALD1-206ENST00000424922 NFKBIZQ9BYH8 718 aa16.29■□□□□ 0.2
CALD1-206ENST00000424922 EDEM3Q9BZQ6 932 aa16.29■□□□□ 0.2
CALD1-206ENST00000424922 FZD8Q9H461 694 aa16.29■□□□□ 0.2
CALD1-206ENST00000424922 HMX1Q9NP08 348 aaPredicted RBP16.29■□□□□ 0.2
CALD1-206ENST00000424922 WBP1LQ9NX94 342 aa16.29■□□□□ 0.2
CALD1-206ENST00000424922 STYXL1Q9Y6J8 313 aa16.29■□□□□ 0.2
CALD1-206ENST00000424922 SMIM35A0A1B0GVV1 85 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 EIF3CLB5ME19 914 aaKnown RBP16.28■□□□□ 0.2
CALD1-206ENST00000424922 ADRB2P07550 413 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 IQCF3P0C7M6 154 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 KRT13P13646 458 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 GPC3P51654 580 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 CBX1P83916 185 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 SLFN12LQ6IEE8 588 aa16.28■□□□□ 0.2
CALD1-206ENST00000424922 CCSAPQ6IQ19 270 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms