RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 CLIC6Q96NY7 704 aa12.04□□□□□ -0.48
USP49-204ENST00000423567 RPS6KC1Q96S38 1066 aa12.04□□□□□ -0.48
USP49-204ENST00000423567 MRPL4Q9BYD3 311 aaKnown RBP12.04□□□□□ -0.48
USP49-204ENST00000423567 NXF3Q9H4D5 531 aaKnown RBP12.04□□□□□ -0.48
USP49-204ENST00000423567 PDZD7Q9H5P4 517 aa12.04□□□□□ -0.48
USP49-204ENST00000423567 TMEM134Q9H6X4 195 aa12.04□□□□□ -0.48
USP49-204ENST00000423567 TFIP11Q9UBB9 837 aaKnown RBP12.04□□□□□ -0.48
USP49-204ENST00000423567 CFAP45Q9UL16 551 aa12.04□□□□□ -0.48
USP49-204ENST00000423567 LZTS1Q9Y250 596 aa12.04□□□□□ -0.48
USP49-204ENST00000423567 PRRC2BQ5JSZ5 2229 aaKnown RBP12.03□□□□□ -0.48
USP49-204ENST00000423567 ARL5CA6NH57 179 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 SLC16A4O15374 487 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 PPP6R2O75170 966 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 POMCP01189 267 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 SCP2P22307 547 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 PBX3P40426 434 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 MLH1P40692 756 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 BCAR1P56945 870 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 MAPK7Q13164 816 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 MCM6Q14566 821 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 ATF7IP2Q5U623 682 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 SV2BQ7L1I2 683 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 SLC39A11Q8N1S5 342 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 MYCT1Q8N699 235 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 KCNG4Q8TDN1 519 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 ASB2Q96Q27 587 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 GAD1Q99259 594 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 REEP2Q9BRK0 252 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 TMEM175Q9BSA9 504 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 ZHX3Q9H4I2 956 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 NRDE2Q9H7Z3 1164 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 UBE2ZQ9H832 354 aaPredicted RBP12.03□□□□□ -0.48
USP49-204ENST00000423567 PARVGQ9HBI0 331 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 ENTPD7Q9NQZ7 604 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 BLOC1S4Q9NUP1 217 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 ARHGAP28Q9P2N2 729 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 STK39Q9UEW8 545 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 HES2Q9Y543 173 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 ZMYM2Q9UBW7 1377 aa12.03□□□□□ -0.48
USP49-204ENST00000423567 NLRC5Q86WI3 1866 aa12.02□□□□□ -0.48
USP49-204ENST00000423567 NPHP3-ACAD11A0A0J9YXS1 232 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 FSD2A1L4K1 749 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 NT5C1B-RDH14C9J2C7 533 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 ALDH2P05091 517 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 GALTP07902 379 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 AKAP5P24588 427 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 DNAJB1P25685 340 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 ABCD1P33897 745 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 CA8P35219 290 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 STAT6P42226 847 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 SCNN1GP51170 649 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 CAMK1Q14012 370 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 USP49Q70CQ1 688 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 TMC7Q7Z402 723 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 TMEM87AQ8NBN3 555 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 PABPC5Q96DU9 382 aaKnown RBP12.02□□□□□ -0.49
USP49-204ENST00000423567 TCF25Q9BQ70 676 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 NTPCRQ9BSD7 190 aaKnown RBP12.02□□□□□ -0.49
USP49-204ENST00000423567 TCHPQ9BT92 498 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 IGFLR1Q9H665 355 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 NGRNQ9NPE2 291 aaKnown RBP12.02□□□□□ -0.49
USP49-204ENST00000423567 CLDND1Q9NY35 253 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 TNFSF13BQ9Y275 285 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 FAN1Q9Y2M0 1017 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 COL6A3P12111 3177 aa12.02□□□□□ -0.49
USP49-204ENST00000423567 FNDC1Q4ZHG4 1894 aaPredicted RBP12.02□□□□□ -0.49
USP49-204ENST00000423567 K7ENM7 598 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 INPPL1O15357 1258 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 CUTAO60888 179 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 KCNA5P22460 613 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 IRS1P35568 1242 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 ME1P48163 572 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 YARSP54577 528 aaKnown RBP12.01□□□□□ -0.49
USP49-204ENST00000423567 TFF2Q03403 129 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 GRIK3Q13003 919 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 SMC1AQ14683 1233 aaKnown RBP12.01□□□□□ -0.49
USP49-204ENST00000423567 ZNF568Q3ZCX4 644 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 ARSHQ5FYA8 562 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 NT5DC1Q5TFE4 455 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 PLPP4Q5VZY2 271 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 EEF1DP3Q658K8 133 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 TMEM92Q6UXU6 159 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 ZNF280BQ86YH2 543 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 TMEM161BQ8NDZ6 487 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 BICD1Q96G01 975 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 IGSF21Q96ID5 467 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 ZFP42Q96MM3 310 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 ACO2Q99798 780 aaKnown RBP12.01□□□□□ -0.49
USP49-204ENST00000423567 TARS2Q9BW92 718 aaKnown RBP12.01□□□□□ -0.49
USP49-204ENST00000423567 PANK2Q9BZ23 570 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 LRRC27Q9C0I9 530 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 TLE6Q9H808 572 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 SNTG2Q9NY99 539 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 KLK14Q9P0G3 267 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 USP20Q9Y2K6 914 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 ATP6V1DQ9Y5K8 247 aa12.01□□□□□ -0.49
USP49-204ENST00000423567 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12□□□□□ -0.49
USP49-204ENST00000423567 FSCN2O14926 492 aa12□□□□□ -0.49
USP49-204ENST00000423567 TRAK2O60296 914 aa12□□□□□ -0.49
USP49-204ENST00000423567 RECQL4O94761 1208 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms