RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 A0A1B0GUA9 196 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 ARHGEF35A5YM69 484 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 LILRB3O75022 631 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 NPTXRO95502 500 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 ADH1AP07327 375 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 CNPP09543 421 aaKnown RBP12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 WEE2P0C1S8 567 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 GLUD2P49448 558 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 NHLH1Q02575 133 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 ZNF174Q15697 407 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 FAM187BQ17R55 369 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 CCDC149Q6ZUS6 474 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 UBALD2Q8IYN6 164 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 RNF168Q8IYW5 571 aaPredicted RBP12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 ZDHHC14Q8IZN3 488 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 KREMEN2Q8NCW0 462 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 ASIC4Q96FT7 647 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 RPS6KC1Q96S38 1066 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 DAXXQ9UER7 740 aaPredicted RBP12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 DPP7Q9UHL4 492 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 SORCS3Q9UPU3 1222 aa12.79□□□□□ -0.36
SQSTM1-203ENST00000422245 A0A087WWV3 80 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 N4BP3O15049 544 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 EFEMP2O95967 443 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 GLUD1P00367 558 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 CYP11B2P19099 503 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 NAMPTP43490 491 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 FXR2P51116 673 aaKnown RBP eCLIP12.78□□□□□ -0.363e-7■■□□□ 12.6
SQSTM1-203ENST00000422245 CREMQ03060 361 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 PPP2R5AQ15172 486 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 PADI6Q6TGC4 694 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 TMC5Q6UXY8 1006 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 C15orf39Q6ZRI6 1047 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 MAEAQ7L5Y9 396 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 GPR149Q86SP6 731 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 GPR65Q8IYL9 337 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 PLCD3Q8N3E9 789 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 CMASQ8NFW8 434 aaPredicted RBP12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 COLEC11Q9BWP8 271 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 FZD8Q9H461 694 aa12.78□□□□□ -0.36
SQSTM1-203ENST00000422245 C2CD2LO14523 706 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 C1RP00736 705 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 PRKCBP05771 671 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 CENPBP07199 599 aaPredicted RBP12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 AKAP5P24588 427 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 PTPN5P54829 565 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 DSG1Q02413 1049 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 MAPK6Q16659 721 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 TMEM132AQ24JP5 1023 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 OTOP3Q7RTS5 596 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 CDR2LQ86X02 465 aaPredicted RBP12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 GSTCDQ8NEC7 633 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 DEPTORQ8TB45 409 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 BSNDQ8WZ55 320 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 ACSF2Q96CM8 615 aaPredicted RBP12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 ADPGKQ9BRR6 497 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 RHOBTB2Q9BYZ6 727 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 RAB34Q9BZG1 259 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 PDZD7Q9H5P4 517 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 RXFP1Q9HBX9 757 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 MAN1C1Q9NR34 630 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 MIOSQ9NXC5 875 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 PARP2Q9UGN5 583 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 STK24Q9Y6E0 443 aa12.77□□□□□ -0.37
SQSTM1-203ENST00000422245 C2orf16Q68DN1 1984 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 TEX28O15482 410 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 U2AF2P26368 475 aaKnown RBP eCLIP12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 CCT6AP40227 531 aaKnown RBP12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 EFNA5P52803 228 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 PRPF4BQ13523 1007 aaKnown RBP12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 KIAA0319Q5VV43 1072 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 KANK3Q6NY19 840 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 FUT10Q6P4F1 479 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 CYP26C1Q6V0L0 522 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 KIFAP3Q92845 792 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 KIF2CQ99661 725 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 CCDC113Q9H0I3 377 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 CHST7Q9NS84 486 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 LRWD1Q9UFC0 647 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 ADAM28Q9UKQ2 775 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 KIF3AQ9Y496 699 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 SF3B1O75533 1304 aaKnown RBP eCLIP12.76□□□□□ -0.378e-6■■□□□ 12.1
SQSTM1-203ENST00000422245 PLXNA3P51805 1871 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 MYO10Q9HD67 2058 aa12.76□□□□□ -0.37
SQSTM1-203ENST00000422245 F8W810 466 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 LAD1O00515 517 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 ACKR2O00590 384 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 BRD1O95696 1058 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 NUBP1P53384 320 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 TUSC3Q13454 348 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 HSP90AA2PQ14568 343 aaPredicted RBP12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 USP41Q3LFD5 358 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 DCAF4L1Q3SXM0 396 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 C8orf34Q49A92 452 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 TAS1R1Q7RTX1 841 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 APBB1IPQ7Z5R6 666 aaPredicted RBP12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 C4orf32Q8N8J7 132 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 PRSS33Q8NF86 280 aa12.75□□□□□ -0.37
SQSTM1-203ENST00000422245 SNX29Q8TEQ0 813 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms