RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 A6NNZ2 444 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 AMHP03971 560 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 SREBF1P36956 1147 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 FSCN1Q16658 493 aaKnown RBP11.45□□□□□ -0.58
PTCH1-206ENST00000421141 TUBB8Q3ZCM7 444 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 SH2D3AQ9BRG2 576 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 MOSPD1Q9UJG1 213 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 NPHP3-ACAD11A0A0J9YXS1 232 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 SLC16A3O15427 465 aaKnown RBP11.45□□□□□ -0.58
PTCH1-206ENST00000421141 ADCY3O60266 1144 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 SNRNP35Q16560 246 aaKnown RBP11.45□□□□□ -0.58
PTCH1-206ENST00000421141 MGAT5BQ3V5L5 792 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 NFRKBQ6P4R8 1299 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 PHLDB2Q86SQ0 1253 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 POLD4Q9HCU8 107 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 EXTL3O43909 919 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 KRT7P08729 469 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 YWHAGP61981 247 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTCH1-206ENST00000421141 PTGISQ16647 500 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 METTL7BQ6UX53 244 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 DHX38Q92620 1227 aaKnown RBP11.45□□□□□ -0.58
PTCH1-206ENST00000421141 RBM41Q96IZ5 413 aaKnown RBP11.45□□□□□ -0.58
PTCH1-206ENST00000421141 SLITRK1Q96PX8 696 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 UNC45AQ9H3U1 944 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 E2F5Q15329 346 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 DEFB128Q7Z7B8 93 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 PGBD3Q8N328 593 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 FNDC3AQ9Y2H6 1198 aaKnown RBP11.45□□□□□ -0.58
PTCH1-206ENST00000421141 SNX9Q9Y5X1 595 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 RGS16O15492 202 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-206ENST00000421141 TBC1D12O60347 775 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 CBX1P83916 185 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 CRY2Q49AN0 593 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 FAM102AQ5T9C2 384 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-206ENST00000421141 VPS18Q9P253 973 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 PCDHA13Q9Y5I0 950 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 CCDC85CA6NKD9 419 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 H3BRB1 525 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 EIF4A3P38919 411 aaKnown RBP11.44□□□□□ -0.58
PTCH1-206ENST00000421141 IQCB1Q15051 598 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 TUT1Q9H6E5 874 aaKnown RBP11.44□□□□□ -0.58
PTCH1-206ENST00000421141 KLHL8Q9P2G9 620 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-206ENST00000421141 RGPD1P0DJD0 1748 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 NAMPTP43490 491 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 IQSEC1Q6DN90 963 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 CCDC13Q8IYE1 715 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 CARD6Q9BX69 1037 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 PARVAQ9NVD7 372 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 MYH4Q9Y623 1939 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 CABYRO75952 493 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 URODP06132 367 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 KPNA2P52292 529 aaKnown RBP11.44□□□□□ -0.58
PTCH1-206ENST00000421141 BASP1P80723 227 aaKnown RBP11.44□□□□□ -0.58
PTCH1-206ENST00000421141 MOXD1Q6UVY6 613 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 C11orf57Q6ZUT1 292 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-206ENST00000421141 DAGLBQ8NCG7 672 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 TRPM4Q8TD43 1214 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 C7orf25Q9BPX7 421 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 MMTAG2Q9BU76 263 aaKnown RBP11.44□□□□□ -0.58
PTCH1-206ENST00000421141 MAGEB5Q9BZ81 275 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 KANSL3Q9P2N6 904 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 DSEQ9UL01 958 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 PPME1Q9Y570 386 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 AHDC1Q5TGY3 1603 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-206ENST00000421141 GPC5P78333 572 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 ACVR2BQ13705 512 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 PANX2Q96RD6 677 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 IP6K2Q9UHH9 426 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 CAPN15O75808 1086 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 SHMT1P34896 483 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 CCDC62Q6P9F0 684 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 PTF1AQ7RTS3 328 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 KAZALD1Q96I82 304 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 SLC4A9Q96Q91 983 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.44□□□□□ -0.58
PTCH1-206ENST00000421141 ZFXP17010 805 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-206ENST00000421141 MUTP22033 750 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 CYP4A22Q5TCH4 519 aa11.44□□□□□ -0.58
PTCH1-206ENST00000421141 PGRMC1O00264 195 aaKnown RBP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 PTPRAP18433 802 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 NMT1P30419 496 aaKnown RBP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 P2RX7Q99572 595 aaKnown RBP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 CNOT8Q9UFF9 292 aaKnown RBP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 ZC3H11AO75152 810 aaKnown RBP eCLIP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 SNX1Q13596 522 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 NAA35Q5VZE5 725 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 KLC3Q6P597 504 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 TAB3Q8N5C8 712 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 KLC2Q9H0B6 622 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 LGALS16A8MUM7 142 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 PAN2Q504Q3 1202 aaKnown RBP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 CCDC121Q6ZUS5 278 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 SDCCAG8Q86SQ7 713 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 ARHGAP18Q8N392 663 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 NKX2-3Q8TAU0 364 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 NT5C1AQ9BXI3 368 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 AGO4Q9HCK5 861 aaKnown RBP11.43□□□□□ -0.58
PTCH1-206ENST00000421141 HSD17B4P51659 736 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 KIZQ2M2Z5 673 aa11.43□□□□□ -0.58
PTCH1-206ENST00000421141 CD302Q8IX05 232 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms