RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 INO80B-WBP1J3KQ70 363 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 EML1O00423 815 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 SLC37A4O43826 429 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 DCNP07585 359 aaKnown RBP11.17□□□□□ -0.62
MDC1-202ENST00000416571 CREMQ03060 361 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 TFDP1Q14186 410 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 MXD4Q14582 209 aaPredicted RBP11.17□□□□□ -0.62
MDC1-202ENST00000416571 USP41Q3LFD5 358 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 PHLDB3Q6NSJ2 640 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 FUT10Q6P4F1 479 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 DCLRE1AQ6PJP8 1040 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 DGLUCYQ7Z3D6 616 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 NEK8Q86SG6 692 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 C4orf19Q8IY42 314 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 FAM177A1Q8N128 213 aaPredicted RBP11.17□□□□□ -0.62
MDC1-202ENST00000416571 ZNF579Q8NAF0 562 aaKnown RBP11.17□□□□□ -0.62
MDC1-202ENST00000416571 DAGLBQ8NCG7 672 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 CPB2Q96IY4 423 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 EIF2AQ9BY44 585 aaKnown RBP11.17□□□□□ -0.62
MDC1-202ENST00000416571 NT5C3AQ9H0P0 336 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 CSRNP2Q9H175 543 aa11.17□□□□□ -0.62
MDC1-202ENST00000416571 DOCK8Q8NF50 2099 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 TGM5O43548 720 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 CCNT1O60563 726 aaKnown RBP11.16□□□□□ -0.62
MDC1-202ENST00000416571 TSPAN1O60635 241 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 C1RP00736 705 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 GCFC2P16383 781 aaKnown RBP11.16□□□□□ -0.62
MDC1-202ENST00000416571 EVCP57679 992 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 DSC1Q08554 894 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 EPHA7Q15375 998 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 NCAPH2Q6IBW4 605 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 CENPQQ7L2Z9 268 aaPredicted RBP11.16□□□□□ -0.62
MDC1-202ENST00000416571 SKAP1Q86WV1 359 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 C1orf210Q8IVY1 113 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 RNF168Q8IYW5 571 aaPredicted RBP11.16□□□□□ -0.62
MDC1-202ENST00000416571 ZNF707Q96C28 371 aaPredicted RBP11.16□□□□□ -0.62
MDC1-202ENST00000416571 RMDN1Q96DB5 314 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 SHDQ96IW2 340 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 B3GALT6Q96L58 329 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 ZFP42Q96MM3 310 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 PRKD2Q9BZL6 878 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 RNF39Q9H2S5 420 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 ZSWIM4Q9H7M6 989 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 CHST7Q9NS84 486 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 ADAM28Q9UKQ2 775 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 VAV3Q9UKW4 847 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 GIT1Q9Y2X7 761 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 HES2Q9Y543 173 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 ZFP37Q9Y6Q3 630 aaPredicted RBP11.16□□□□□ -0.62
MDC1-202ENST00000416571 NUMBLQ9Y6R0 609 aa11.16□□□□□ -0.62
MDC1-202ENST00000416571 FASNP49327 2511 aaKnown RBP11.16□□□□□ -0.62
MDC1-202ENST00000416571 MIA3Q5JRA6 1907 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 F8W810 466 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 M0R2N6 131 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 TBX3O15119 743 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 TADA2AO75478 443 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 REC8O95072 547 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 BAG4O95429 457 aaKnown RBP11.15□□□□□ -0.62
MDC1-202ENST00000416571 SP9P0CG40 484 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 XBP1P17861 261 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 FSHRP23945 695 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 PTENP60484 403 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 CYP4A11Q02928 519 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 GRIK3Q13003 919 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 HTR4Q13639 388 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 LIN9Q5TKA1 542 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 PPP4R3AQ6IN85 833 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 RUFY3Q7L099 469 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 GPR65Q8IYL9 337 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 RUBCNQ92622 972 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 DYDC2Q96IM9 177 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 NAP1L4Q99733 375 aaKnown RBP11.15□□□□□ -0.62
MDC1-202ENST00000416571 NXF3Q9H4D5 531 aaKnown RBP11.15□□□□□ -0.62
MDC1-202ENST00000416571 KCNMB3Q9NPA1 279 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 SLC2A4RGQ9NR83 387 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 MIOSQ9NXC5 875 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 RGL1Q9NZL6 768 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 FNIP2Q9P278 1114 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 WRAP73Q9P2S5 460 aaPredicted RBP11.15□□□□□ -0.62
MDC1-202ENST00000416571 PARP2Q9UGN5 583 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 KCNJ14Q9UNX9 436 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 MYH15Q9Y2K3 1946 aa11.15□□□□□ -0.62
MDC1-202ENST00000416571 SF3B1O75533 1304 aaKnown RBP eCLIP11.14□□□□□ -0.63
MDC1-202ENST00000416571 EP300Q09472 2414 aaPredicted RBP11.14□□□□□ -0.63
MDC1-202ENST00000416571 ANHXE9PGG2 379 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 KINO60870 393 aaKnown RBP11.14□□□□□ -0.63
MDC1-202ENST00000416571 ZMYND10O75800 440 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 EFEMP2O95967 443 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 RPL17P18621 184 aaKnown RBP11.14□□□□□ -0.63
MDC1-202ENST00000416571 AKAP5P24588 427 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 STK3Q13188 491 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 TOB2Q14106 344 aaPredicted RBP11.14□□□□□ -0.63
MDC1-202ENST00000416571 CTTNQ14247 550 aaKnown RBP11.14□□□□□ -0.63
MDC1-202ENST00000416571 PUM1Q14671 1186 aaKnown RBP eCLIP11.14□□□□□ -0.63
MDC1-202ENST00000416571 SLC27A1Q6PCB7 646 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 MTSS1LQ765P7 747 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 TPH2Q8IWU9 490 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 ST13P5Q8NFI4 369 aaPredicted RBP11.14□□□□□ -0.63
MDC1-202ENST00000416571 PJA1Q8NG27 643 aa11.14□□□□□ -0.63
MDC1-202ENST00000416571 ZNF274Q96GC6 653 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms