RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 ITGB1P05556 798 aa19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 GAP43P17677 238 aa19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 MLH1P40692 756 aa19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 ALDH7A1P49419 539 aaKnown RBP19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 AMPD3Q01432 767 aa19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 UBE3AQ05086 875 aa19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 ZNF568Q3ZCX4 644 aa19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 EEF1DP3Q658K8 133 aa19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 ADALQ6DHV7 355 aa19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 KCNT2Q6UVM3 1135 aa19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 THNSL1Q8IYQ7 743 aa19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 CHAMP1Q96JM3 812 aa19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 ASB2Q96Q27 587 aa19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 TARS2Q9BW92 718 aaKnown RBP19.77■□□□□ 0.76
SEMA3B-201ENST00000416295 GRM6O15303 877 aa19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 ZC3H11AO75152 810 aaKnown RBP eCLIP19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 FGF18O76093 207 aa19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 CMA1P23946 247 aa19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 AAK1Q2M2I8 961 aa19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 TIGD5Q53EQ6 642 aa19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 ZPBP2Q6X784 338 aa19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 DNAJC19Q96DA6 116 aa19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 FAM193BQ96PV7 902 aaPredicted RBP19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 RPS6KC1Q96S38 1066 aa19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 GAD1Q99259 594 aa19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 ALG13Q9NP73 1137 aaKnown RBP19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 KBTBD4Q9NVX7 518 aa19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 SPG21Q9NZD8 308 aa19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 PARP2Q9UGN5 583 aa19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 KCNH3Q9ULD8 1083 aa19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 CIZ1Q9ULV3 898 aaPredicted RBP19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 PRRC2BQ5JSZ5 2229 aaKnown RBP19.76■□□□□ 0.75
SEMA3B-201ENST00000416295 KIAA1671Q9BY89 1806 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 TOM1L1O75674 476 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 POMCP01189 267 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 AKAP5P24588 427 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 BCAR1P56945 870 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 PLCB3Q01970 1234 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 MPZL3Q6UWV2 235 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 SFR1Q86XK3 245 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 BICD1Q96G01 975 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 TCHPQ9BT92 498 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 CDT1Q9H211 546 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 ST6GALNAC4Q9H4F1 302 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 NRDE2Q9H7Z3 1164 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 PTPRHQ9HD43 1115 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 TBX20Q9UMR3 447 aa19.75■□□□□ 0.75
SEMA3B-201ENST00000416295 MYH11P35749 1972 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 RECQL4O94761 1208 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 MCF2P10911 925 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 IDEP14735 1019 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 PROZP22891 400 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 GTF2BQ00403 316 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 KRT17Q04695 432 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 SKIV2LQ15477 1246 aaKnown RBP19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 CCDC65Q8IXS2 484 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 SPPL3Q8TCT6 385 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 ZFP42Q96MM3 310 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 FIZ1Q96SL8 496 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 TMEM175Q9BSA9 504 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 GBP3Q9H0R5 595 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 OLFML3Q9NRN5 406 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 SNTG2Q9NY99 539 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 PUF60Q9UHX1 559 aaKnown RBP19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 LZTS1Q9Y250 596 aa19.74■□□□□ 0.75
SEMA3B-201ENST00000416295 FRMD3A2A2Y4 597 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 HNRNPDLO14979 420 aaKnown RBP19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 PFKFB1P16118 471 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 NMT1P30419 496 aaKnown RBP19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 PBX3P40426 434 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 LIG4P49917 911 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 SCNN1GP51170 649 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 AFF1P51825 1210 aaKnown RBP19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 GRIK3Q13003 919 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 HERC4Q5GLZ8 1057 aaPredicted RBP19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 CNNM4Q6P4Q7 775 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 CEP57L1Q8IYX8 460 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 SLC39A11Q8N1S5 342 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 POF1BQ8WVV4 589 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 STAMQ92783 540 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 HVCN1Q96D96 273 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 CCDC94Q9BW85 323 aaPredicted RBP19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 TRIM9Q9C026 710 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 NSUN3Q9H649 340 aaKnown RBP19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 MRPL44Q9H9J2 332 aaKnown RBP19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 PANK4Q9NVE7 773 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 KLK14Q9P0G3 267 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 ANKFY1Q9P2R3 1169 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 USP25Q9UHP3 1055 aa19.73■□□□□ 0.75
SEMA3B-201ENST00000416295 A0A1W2PQ27 194 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 A0A1W2PQ64 194 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 A0A1W2PQD8 194 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 ABLIM1O14639 778 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 CLDN3O15551 220 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 PIGRP01833 764 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 GRM5P41594 1212 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 YARSP54577 528 aaKnown RBP19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 ALCAMQ13740 583 aa19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 NOLC1Q14978 699 aaKnown RBP eCLIP19.72■□□□□ 0.75
SEMA3B-201ENST00000416295 ZNF720Q7Z2F6 126 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms