RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 IGSF22Q8N9C0 903 aa19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 DEPTORQ8TB45 409 aa19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 BSNDQ8WZ55 320 aa19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 UPF2Q9HAU5 1272 aaKnown RBP19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 KIAA1024Q9UPX6 916 aa19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 PCDHB6Q9Y5E3 794 aa19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 PRKCBP05771 671 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 CNPP09543 421 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 PRPHP41219 470 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 GRIK3Q13003 919 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 PRPF4BQ13523 1007 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 TMEM132AQ24JP5 1023 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 KIAA1841Q6NSI8 718 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 TRIM67Q6ZTA4 783 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 HFE2Q6ZVN8 426 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 BMP8AQ7Z5Y6 402 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 CABP7Q86V35 215 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 C12orf76Q8N812 135 aaPredicted RBP19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 GSTCDQ8NEC7 633 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 KIFAP3Q92845 792 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 IFT74Q96LB3 600 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 MFSD14AQ96MC6 490 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 RPS6KC1Q96S38 1066 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 BHMT2Q9H2M3 363 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 POMKQ9H5K3 350 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 C5orf42Q9H799 3197 aa19.43■□□□□ 0.7
PDLIM2-208ENST00000416159 ACKR2O00590 384 aa19.42■□□□□ 0.7
PDLIM2-208ENST00000416159 EFEMP2O95967 443 aa19.42■□□□□ 0.7
PDLIM2-208ENST00000416159 CLCN4P51793 760 aa19.42■□□□□ 0.7
PDLIM2-208ENST00000416159 KRT79Q5XKE5 535 aa19.42■□□□□ 0.7
PDLIM2-208ENST00000416159 RNF168Q8IYW5 571 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-208ENST00000416159 SNX29Q8TEQ0 813 aa19.42■□□□□ 0.7
PDLIM2-208ENST00000416159 TMX3Q96JJ7 454 aa19.42■□□□□ 0.7
PDLIM2-208ENST00000416159 FBXL18Q96ME1 805 aa19.42■□□□□ 0.7
PDLIM2-208ENST00000416159 ADPGKQ9BRR6 497 aa19.42■□□□□ 0.7
PDLIM2-208ENST00000416159 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-208ENST00000416159 DDX19AQ9NUU7 478 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-208ENST00000416159 KLK14Q9P0G3 267 aa19.42■□□□□ 0.7
PDLIM2-208ENST00000416159 CDH22Q9UJ99 828 aa19.42■□□□□ 0.7
PDLIM2-208ENST00000416159 TMEM221A6NGB7 291 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 SPDYE4A6NLX3 237 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 M0R296 226 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 GLUD2P49448 558 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 MCM2P49736 904 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 EFNA5P52803 228 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 RILPL1Q5EBL4 403 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 MCTP1Q6DN14 999 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 DTHD1Q6ZMT9 781 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 TAS1R1Q7RTX1 841 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 CCDC113Q9H0I3 377 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 KCNH6Q9H252 994 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 PDZD7Q9H5P4 517 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 SFXN1Q9H9B4 322 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 TSHZ2Q9NRE2 1034 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 DNM3Q9UQ16 869 aa19.41■□□□□ 0.7
PDLIM2-208ENST00000416159 MYO10Q9HD67 2058 aa19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 TTLL13PA6NNM8 815 aa19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 C2CD2LO14523 706 aa19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 ADH1AP07327 375 aa19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 WEE2P0C1S8 567 aa19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 LIG1P18858 919 aa19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 SP100P23497 879 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 DSG1Q02413 1049 aa19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 SIGLEC14Q08ET2 396 aa19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 PTPN21Q16825 1174 aa19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 KIAA0319Q5VV43 1072 aa19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 GPR65Q8IYL9 337 aa19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 RXFP1Q9HBX9 757 aa19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 SNTG2Q9NY99 539 aa19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 DPP7Q9UHL4 492 aa19.4■□□□□ 0.7
PDLIM2-208ENST00000416159 C2CD4DB7Z1M9 353 aa19.39■□□□□ 0.69
PDLIM2-208ENST00000416159 USP41Q3LFD5 358 aa19.39■□□□□ 0.69
PDLIM2-208ENST00000416159 DCAF4L1Q3SXM0 396 aa19.39■□□□□ 0.69
PDLIM2-208ENST00000416159 KANK3Q6NY19 840 aa19.39■□□□□ 0.69
PDLIM2-208ENST00000416159 FUT10Q6P4F1 479 aa19.39■□□□□ 0.69
PDLIM2-208ENST00000416159 ELMSAN1Q6PJG2 1045 aa19.39■□□□□ 0.69
PDLIM2-208ENST00000416159 TMC5Q6UXY8 1006 aa19.39■□□□□ 0.69
PDLIM2-208ENST00000416159 GPR149Q86SP6 731 aa19.39■□□□□ 0.69
PDLIM2-208ENST00000416159 ZBTB33Q86T24 672 aa19.39■□□□□ 0.69
PDLIM2-208ENST00000416159 PBXIP1Q96AQ6 731 aa19.39■□□□□ 0.69
PDLIM2-208ENST00000416159 POLD4Q9HCU8 107 aa19.39■□□□□ 0.69
PDLIM2-208ENST00000416159 CHST7Q9NS84 486 aa19.39■□□□□ 0.69
PDLIM2-208ENST00000416159 ADAM28Q9UKQ2 775 aa19.39■□□□□ 0.69
PDLIM2-208ENST00000416159 USTQ9Y2C2 406 aa19.39■□□□□ 0.69
PDLIM2-208ENST00000416159 E9PMD0 336 aa19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 F8W810 466 aa19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 H3BQV1 296 aa19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 K7ERI5 159 aa19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 TEX28O15482 410 aa19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 TADA2AO75478 443 aa19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 C1RP00736 705 aa19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 THP07101 528 aa19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 GJB2P29033 226 aa19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 TUSC3Q13454 348 aa19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 IL17AQ16552 155 aa19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 APBB1IPQ7Z5R6 666 aaPredicted RBP19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 PLCD3Q8N3E9 789 aa19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 GPR62Q9BZJ7 368 aa19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.38■□□□□ 0.69
PDLIM2-208ENST00000416159 PP2D1A8MPX8 630 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms