RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 LGALS2P05162 132 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 BRDTQ58F21 947 aaPredicted RBP12.54□□□□□ -0.4
RFFL-205ENST00000415395 ZNF484Q5JVG2 852 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 KSR1Q8IVT5 923 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 EFCAB13Q8IY85 973 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 C10orf67Q8IYJ2 551 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 FAM186BQ8IYM0 893 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 AENQ8WTP8 325 aaKnown RBP12.54□□□□□ -0.4
RFFL-205ENST00000415395 BORCS6Q96GS4 357 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 CREBZFQ9NS37 354 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 GTPBP10A4D1E9 387 aaKnown RBP12.54□□□□□ -0.4
RFFL-205ENST00000415395 KIAA0391O15091 583 aaKnown RBP12.54□□□□□ -0.4
RFFL-205ENST00000415395 SHOX2O60902 331 aaPredicted RBP12.54□□□□□ -0.4
RFFL-205ENST00000415395 SRGAP2O75044 1071 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 AFPP02771 609 aaKnown RBP12.54□□□□□ -0.4
RFFL-205ENST00000415395 SMPD1P17405 629 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 GLRA2P23416 452 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 FCGRTP55899 365 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 MCCD1P59942 119 aaPredicted RBP12.54□□□□□ -0.4
RFFL-205ENST00000415395 TNFAIP2Q03169 654 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 ENPEPQ07075 957 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 KCNH2Q12809 1159 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 MXD4Q14582 209 aaPredicted RBP12.54□□□□□ -0.4
RFFL-205ENST00000415395 CYP4F22Q6NT55 531 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 LRRC31Q6UY01 552 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 PAXIP1Q6ZW49 1069 aaPredicted RBP12.54□□□□□ -0.4
RFFL-205ENST00000415395 CACNA2D4Q7Z3S7 1137 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 TRIM50Q86XT4 487 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 OR6J1Q8NGC5 347 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 AFG1LQ8WV93 481 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 SYN2Q92777 582 aaPredicted RBP12.54□□□□□ -0.4
RFFL-205ENST00000415395 CFHR5Q9BXR6 569 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 LACRTQ9GZZ8 138 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 TMEM134Q9H6X4 195 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 RNF216Q9NWF9 866 aaPredicted RBP12.54□□□□□ -0.4
RFFL-205ENST00000415395 RSPH14Q9UHP6 348 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 TRPC6Q9Y210 931 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 Q9Y3F1 56 aa12.54□□□□□ -0.4
RFFL-205ENST00000415395 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.53□□□□□ -0.4
RFFL-205ENST00000415395 ZBTB42B2RXF5 422 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 MAGEB2O15479 319 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 EXOC3O60645 756 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 PIGRP01833 764 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 MMP3P08254 477 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 GARTP22102 1010 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 MARK3P27448 753 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 MAGEA1P43355 309 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 EFNA5P52803 228 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 C2orf54Q08AI8 447 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 MAPK8IP2Q13387 824 aaPredicted RBP12.53□□□□□ -0.4
RFFL-205ENST00000415395 DGKDQ16760 1214 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 DEFB115Q30KQ5 88 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 CFAP221Q4G0U5 840 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 TMEM63BQ5T3F8 832 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 INTS8Q75QN2 995 aaKnown RBP12.53□□□□□ -0.4
RFFL-205ENST00000415395 IFT20Q8IY31 132 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 XXYLT1Q8NBI6 393 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 DEPTORQ8TB45 409 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 PSPC1Q8WXF1 523 aaKnown RBP12.53□□□□□ -0.4
RFFL-205ENST00000415395 CAVIN3Q969G5 261 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 TMEM143Q96AN5 459 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 OSBPL9Q96SU4 736 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 MMRN2Q9H8L6 949 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 STIM2Q9P246 746 aa12.53□□□□□ -0.4
RFFL-205ENST00000415395 ADGRA3Q8IWK6 1321 aa12.52□□□□□ -0.4
RFFL-205ENST00000415395 KAT6AQ92794 2004 aa12.52□□□□□ -0.4
RFFL-205ENST00000415395 GRID2IPA4D2P6 1211 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 ASAP2O43150 1006 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 TFRCP02786 760 aaKnown RBP12.52□□□□□ -0.41
RFFL-205ENST00000415395 ZNF865P0CJ78 1059 aaPredicted RBP12.52□□□□□ -0.41
RFFL-205ENST00000415395 CNGA1P29973 690 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 GGCXP38435 758 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 CASP4P49662 377 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 SOX10P56693 466 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 CORO7P57737 925 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 STRN3Q13033 797 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 TTC31Q49AM3 519 aaPredicted RBP12.52□□□□□ -0.41
RFFL-205ENST00000415395 SLC9C1Q4G0N8 1177 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 C8orf74Q6P047 294 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 SND1Q7KZF4 910 aaKnown RBP eCLIP12.52□□□□□ -0.41
RFFL-205ENST00000415395 SPATS2Q86XZ4 545 aaKnown RBP12.52□□□□□ -0.41
RFFL-205ENST00000415395 SPATA4Q8NEY3 305 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 ASAP3Q8TDY4 903 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.52□□□□□ -0.41
RFFL-205ENST00000415395 SLC35C1Q96A29 364 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 C16orf70Q9BSU1 422 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 HSPBP1Q9NZL4 362 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 GNEQ9Y223 722 aaKnown RBP12.52□□□□□ -0.41
RFFL-205ENST00000415395 DAAM1Q9Y4D1 1078 aa12.52□□□□□ -0.41
RFFL-205ENST00000415395 A6NJR5 290 aa12.51□□□□□ -0.41
RFFL-205ENST00000415395 ADCY3O60266 1144 aa12.51□□□□□ -0.41
RFFL-205ENST00000415395 KRT13P13646 458 aa12.51□□□□□ -0.41
RFFL-205ENST00000415395 CYP2B6P20813 491 aa12.51□□□□□ -0.41
RFFL-205ENST00000415395 EIF4A3P38919 411 aaKnown RBP12.51□□□□□ -0.41
RFFL-205ENST00000415395 CYP2J2P51589 502 aa12.51□□□□□ -0.41
RFFL-205ENST00000415395 LACTBP83111 547 aaPredicted RBP12.51□□□□□ -0.41
RFFL-205ENST00000415395 CYP27A1Q02318 531 aa12.51□□□□□ -0.41
RFFL-205ENST00000415395 POU5F1BQ06416 359 aa12.51□□□□□ -0.41
RFFL-205ENST00000415395 BFSP1Q12934 665 aa12.51□□□□□ -0.41
RFFL-205ENST00000415395 GJC2Q5T442 439 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms