RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TSKSQ9UJT2 592 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 UBOX5O94941 541 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 MUM1Q2TAK8 710 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 HSP90AA4PQ58FG1 418 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 LRIG3Q6UXM1 1119 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 TMCO5AQ8N6Q1 288 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 GMCL1Q96IK5 515 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 DRC3Q9H069 523 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 CCDC68Q9H2F9 335 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 LARSQ9P2J5 1176 aaKnown RBP21.84■■□□□ 1.09
AP1S3-205ENST00000415298 PCNTO95613 3336 aa21.84■■□□□ 1.09
AP1S3-205ENST00000415298 A0A1B0GTH6 734 aa21.83■■□□□ 1.09
AP1S3-205ENST00000415298 PLS1Q14651 629 aa21.83■■□□□ 1.09
AP1S3-205ENST00000415298 DCAF4Q8WV16 495 aa21.83■■□□□ 1.09
AP1S3-205ENST00000415298 CCT7Q99832 543 aa21.83■■□□□ 1.09
AP1S3-205ENST00000415298 ALG1Q9BT22 464 aa21.83■■□□□ 1.09
AP1S3-205ENST00000415298 FBXO28Q9NVF7 368 aa21.83■■□□□ 1.09
AP1S3-205ENST00000415298 FADS3Q9Y5Q0 445 aa21.83■■□□□ 1.09
AP1S3-205ENST00000415298 BOLA2-SMG1P6H3BVE0 249 aa21.83■■□□□ 1.09
AP1S3-205ENST00000415298 COPS2P61201 443 aa21.83■■□□□ 1.09
AP1S3-205ENST00000415298 TMEM259Q4ZIN3 620 aa21.83■■□□□ 1.09
AP1S3-205ENST00000415298 GJC2Q5T442 439 aaPredicted RBP21.83■■□□□ 1.09
AP1S3-205ENST00000415298 TRIM22Q8IYM9 498 aa21.83■■□□□ 1.09
AP1S3-205ENST00000415298 ADGRF4Q8IZF3 695 aa21.83■■□□□ 1.09
AP1S3-205ENST00000415298 PIGSQ96S52 555 aa21.83■■□□□ 1.09
AP1S3-205ENST00000415298 RNF26Q9BY78 433 aaPredicted RBP21.83■■□□□ 1.09
AP1S3-205ENST00000415298 SEL1LQ9UBV2 794 aa21.83■■□□□ 1.09
AP1S3-205ENST00000415298 ANO9A1A5B4 782 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 ZNF185O15231 689 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 TTI1O43156 1089 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 GALNTL6Q49A17 601 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 GPATCH4Q5T3I0 446 aaKnown RBP21.82■■□□□ 1.08
AP1S3-205ENST00000415298 AS3MTQ9HBK9 375 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 CYP39A1Q9NYL5 469 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 MYH6P13533 1939 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 CYP1A1P04798 512 aaPredicted RBP21.82■■□□□ 1.08
AP1S3-205ENST00000415298 SKIP12755 728 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 RCN2Q14257 317 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 BPHLQ86WA6 291 aaPredicted RBP21.82■■□□□ 1.08
AP1S3-205ENST00000415298 KIF2BQ8N4N8 673 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 RBM46Q8TBY0 533 aaKnown RBP21.82■■□□□ 1.08
AP1S3-205ENST00000415298 GATA6Q92908 595 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 CTAGE1Q96RT6 745 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 CENPKQ9BS16 269 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 SH2D4AQ9H788 454 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 JMJD4Q9H9V9 463 aa21.82■■□□□ 1.08
AP1S3-205ENST00000415298 LUC7L2Q9Y383 392 aaKnown RBP21.82■■□□□ 1.08
AP1S3-205ENST00000415298 ASMTLO95671 621 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 ERVK-24P63145 666 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 CDK17Q00537 523 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 IKQ13123 557 aaPredicted RBP21.81■■□□□ 1.08
AP1S3-205ENST00000415298 SAFBQ15424 915 aaKnown RBP eCLIP21.81■■□□□ 1.08
AP1S3-205ENST00000415298 GPKOWQ92917 476 aaPredicted RBP eCLIP21.81■■□□□ 1.08
AP1S3-205ENST00000415298 CENPTQ96BT3 561 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 ZNF333Q96JL9 665 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 RIOX1Q9H6W3 641 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 ABCF3Q9NUQ8 709 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 ATAD3AQ9NVI7 634 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 PLAAQ9Y263 795 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 POTEFA5A3E0 1075 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 GJA5P36382 358 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 MATR3P43243 847 aaKnown RBP eCLIP21.81■■□□□ 1.08
AP1S3-205ENST00000415298 PTDSS1P48651 473 aaKnown RBP21.81■■□□□ 1.08
AP1S3-205ENST00000415298 MKRN3Q13064 507 aaKnown RBP21.81■■□□□ 1.08
AP1S3-205ENST00000415298 ODF2Q5BJF6 829 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 SH3D19Q5HYK7 790 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 PHLDB3Q6NSJ2 640 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 ASRGL1Q7L266 308 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 ERO1BQ86YB8 467 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 IFT20Q8IY31 132 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 ENDOVQ8N8Q3 282 aaKnown RBP21.81■■□□□ 1.08
AP1S3-205ENST00000415298 VPS54Q9P1Q0 977 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 SAMD15Q9P1V8 674 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 SSX2IPQ9Y2D8 614 aa21.81■■□□□ 1.08
AP1S3-205ENST00000415298 FAM32AQ9Y421 112 aaKnown RBP21.81■■□□□ 1.08
AP1S3-205ENST00000415298 DEXIO95424 95 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 BNIP1Q12981 228 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 LONRF3Q496Y0 759 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 LIN52Q52LA3 116 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 ERMARDQ5T6L9 678 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 C2orf69Q8N8R5 385 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 SCAIQ8N9R8 606 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 KCNG4Q8TDN1 519 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 CASP10Q92851 521 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 SLC10A4Q96EP9 437 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 RAB3IPQ96QF0 476 aaPredicted RBP21.8■■□□□ 1.08
AP1S3-205ENST00000415298 SPZ1Q9BXG8 430 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 HOXC10Q9NYD6 342 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 TRIM10Q9UDY6 481 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 CNOT8Q9UFF9 292 aaKnown RBP21.8■■□□□ 1.08
AP1S3-205ENST00000415298 KCNJ14Q9UNX9 436 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 NFE2L3Q9Y4A8 694 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 CCDC162PA2VCL2 907 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 PEX11AO75192 247 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 PDCD4Q53EL6 469 aaKnown RBP21.8■■□□□ 1.08
AP1S3-205ENST00000415298 HAUS3Q68CZ6 603 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 ZNF784Q8NCA9 323 aaPredicted RBP21.8■■□□□ 1.08
AP1S3-205ENST00000415298 STK36Q9NRP7 1315 aa21.8■■□□□ 1.08
AP1S3-205ENST00000415298 NVLO15381 856 aaKnown RBP21.79■■□□□ 1.08
AP1S3-205ENST00000415298 MRPS25P82663 173 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms