RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 NOLC1Q14978 699 aaKnown RBP eCLIP10.56□□□□□ -0.72
RIF1-202ENST00000414861 NR1I3Q14994 352 aa10.56□□□□□ -0.72
RIF1-202ENST00000414861 MAN2A1Q16706 1144 aa10.56□□□□□ -0.72
RIF1-202ENST00000414861 TMEM132AQ24JP5 1023 aa10.56□□□□□ -0.72
RIF1-202ENST00000414861 DCAF17Q5H9S7 520 aaPredicted RBP10.56□□□□□ -0.72
RIF1-202ENST00000414861 MPZL3Q6UWV2 235 aa10.56□□□□□ -0.72
RIF1-202ENST00000414861 CRELD2Q6UXH1 353 aaPredicted RBP10.56□□□□□ -0.72
RIF1-202ENST00000414861 CATSPER4Q7RTX7 472 aa10.56□□□□□ -0.72
RIF1-202ENST00000414861 GPD1LQ8N335 351 aa10.56□□□□□ -0.72
RIF1-202ENST00000414861 CEP120Q8N960 986 aa10.56□□□□□ -0.72
RIF1-202ENST00000414861 ANKRD20A12PQ8NF67 263 aa10.56□□□□□ -0.72
RIF1-202ENST00000414861 NOC2LQ9Y3T9 749 aaKnown RBP10.56□□□□□ -0.72
RIF1-202ENST00000414861 M0QZ92 97 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 PES1O00541 588 aaKnown RBP10.55□□□□□ -0.72
RIF1-202ENST00000414861 PQBP1O60828 265 aaKnown RBP10.55□□□□□ -0.72
RIF1-202ENST00000414861 CD4P01730 458 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 DEKP35659 375 aaKnown RBP10.55□□□□□ -0.72
RIF1-202ENST00000414861 DLG4P78352 724 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 ZNF618Q5T7W0 954 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 SLFN12LQ6IEE8 588 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 TRAF7Q6Q0C0 670 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 CCDC155Q8N6L0 562 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 SLC35C1Q96A29 364 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 FAM84AQ96KN4 292 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 TCHPQ9BT92 498 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 AGPAT5Q9NUQ2 364 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 SCN5AQ14524 2016 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 TANC1Q9C0D5 1861 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 EXTL3O43909 919 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 CKBP12277 381 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 SFPQP23246 707 aaKnown RBP eCLIP10.55□□□□□ -0.72
RIF1-202ENST00000414861 BFSP1Q12934 665 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 VWA3BQ502W6 1294 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 C1orf220Q5T0J3 134 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 TMEM192Q8IY95 271 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 SPC24Q8NBT2 197 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 ANP32BQ92688 251 aaKnown RBP10.55□□□□□ -0.72
RIF1-202ENST00000414861 NDST4Q9H3R1 872 aa10.55□□□□□ -0.72
RIF1-202ENST00000414861 AGO3Q9H9G7 860 aaKnown RBP10.55□□□□□ -0.72
RIF1-202ENST00000414861 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.55□□□□□ -0.72
RIF1-202ENST00000414861 A0A1B0GUA9 196 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 CBFA2T2O43439 604 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 GHRP10912 638 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 PBX1P40424 430 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 UBXN1Q04323 297 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 CYP24A1Q07973 514 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 MBTPS1Q14703 1052 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 TRIM60Q495X7 471 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 TCERG1LQ5VWI1 586 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 SLC39A5Q6ZMH5 540 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 ZNF710Q8N1W2 664 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 PAWRQ96IZ0 340 aaKnown RBP10.54□□□□□ -0.72
RIF1-202ENST00000414861 METTL14Q9HCE5 456 aaKnown RBP10.54□□□□□ -0.72
RIF1-202ENST00000414861 MAPK13O15264 365 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 OGTO15294 1046 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 RPLP2P05387 115 aaKnown RBP10.54□□□□□ -0.72
RIF1-202ENST00000414861 CDC25BP30305 580 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 OSTNP61366 133 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 KCNH2Q12809 1159 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 FILIP1LQ4L180 1135 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 FAM26DQ5JW98 314 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 FBXO47Q5MNV8 452 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 INTS8Q75QN2 995 aaKnown RBP10.54□□□□□ -0.72
RIF1-202ENST00000414861 VSTM4Q8IW00 320 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 THNSL1Q8IYQ7 743 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 MFSD14AQ96MC6 490 aa10.54□□□□□ -0.72
RIF1-202ENST00000414861 EIF2AQ9BY44 585 aaKnown RBP10.54□□□□□ -0.72
RIF1-202ENST00000414861 TOPORSQ9NS56 1045 aaPredicted RBP10.54□□□□□ -0.72
RIF1-202ENST00000414861 PIN4Q9Y237 131 aaKnown RBP10.54□□□□□ -0.72
RIF1-202ENST00000414861 RALGAPA2Q2PPJ7 1873 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 UMODL1Q5DID0 1318 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 KIAA0391O15091 583 aaKnown RBP10.53□□□□□ -0.72
RIF1-202ENST00000414861 MEFVO15553 781 aaPredicted RBP10.53□□□□□ -0.72
RIF1-202ENST00000414861 RPS6KA5O75582 802 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 KLK7P49862 253 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 VAMP7P51809 220 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 LPIN1Q14693 890 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 ANKLE1Q8NAG6 615 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 CCDC127Q96BQ5 260 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 POP1Q99575 1024 aaKnown RBP10.53□□□□□ -0.72
RIF1-202ENST00000414861 MMRN2Q9H8L6 949 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 ST3GAL5Q9UNP4 418 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 ALPK3Q96L96 1907 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 PTPRJQ12913 1337 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 ZNF233A6NK53 670 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 LRRIQ3A6PVS8 624 aaPredicted RBP10.53□□□□□ -0.72
RIF1-202ENST00000414861 TULP1O00294 542 aaPredicted RBP10.53□□□□□ -0.72
RIF1-202ENST00000414861 CAND2O75155 1236 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 NPTXRO95502 500 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 KRT13P13646 458 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 CD52P31358 61 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 PPP3CAQ08209 521 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 RBL2Q08999 1139 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 CCDC173Q0VFZ6 552 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 PCBP1Q15365 356 aaKnown RBP eCLIP10.53□□□□□ -0.72
RIF1-202ENST00000414861 CBWD6Q4V339 395 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 CBWD3Q5JTY5 395 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 CBWD5Q5RIA9 395 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 NOTUMQ6P988 496 aa10.53□□□□□ -0.72
RIF1-202ENST00000414861 ANKRD33Q7Z3H0 272 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms