RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 VPS16Q9H269 839 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 MINDY3Q9H8M7 445 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 PRDM16Q9HAZ2 1276 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 KMT5AQ9NQR1 393 aa10.88□□□□□ -0.67
DDB1-202ENST00000414411 LRRIQ4A6NIV6 560 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 TLR3O15455 904 aaKnown RBP10.87□□□□□ -0.67
DDB1-202ENST00000414411 TPM1P09493 284 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 MYBP10242 640 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 CKBP12277 381 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 EEF1GP26641 437 aaKnown RBP10.87□□□□□ -0.67
DDB1-202ENST00000414411 THPOP40225 353 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 EFNA5P52803 228 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 CRYBB1P53674 252 aaPredicted RBP10.87□□□□□ -0.67
DDB1-202ENST00000414411 GNG11P61952 73 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 BMT2Q1RMZ1 405 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 ZC2HC1CQ53FD0 456 aaPredicted RBP10.87□□□□□ -0.67
DDB1-202ENST00000414411 ZNF618Q5T7W0 954 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 TTI2Q6NXR4 508 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 LRRN4CLQ8ND94 238 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 DEPTORQ8TB45 409 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 CAGE1Q8TC20 777 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 TMEM40Q8WWA1 233 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 NLRP4Q96MN2 994 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 WDR24Q96S15 920 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 CCDC113Q9H0I3 377 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 THAP9Q9H5L6 903 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 TMEM134Q9H6X4 195 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 TBX21Q9UL17 535 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 ADGRG1Q9Y653 693 aa10.87□□□□□ -0.67
DDB1-202ENST00000414411 DARSP14868 501 aaKnown RBP10.86□□□□□ -0.67
DDB1-202ENST00000414411 EIF4BP23588 611 aaKnown RBP10.86□□□□□ -0.67
DDB1-202ENST00000414411 KCNA1Q09470 495 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 ALCAMQ13740 583 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 SRGAP1Q7Z6B7 1085 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 TNS4Q8IZW8 715 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 GUF1Q8N442 669 aaKnown RBP10.86□□□□□ -0.67
DDB1-202ENST00000414411 NLRP7Q8WX94 980 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 DHTKD1Q96HY7 919 aaPredicted RBP10.86□□□□□ -0.67
DDB1-202ENST00000414411 PPP1R16BQ96T49 567 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 NOC4LQ9BVI4 516 aaKnown RBP10.86□□□□□ -0.67
DDB1-202ENST00000414411 C2orf40Q9H1Z8 148 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 FZD8Q9H461 694 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 ABHD10Q9NUJ1 306 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 WDR70Q9NW82 654 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 ATP11BQ9Y2G3 1177 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 CDY2AQ9Y6F7 541 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 ALPK3Q96L96 1907 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 SIP14410 1827 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 DENND3A2RUS2 1198 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 CCDC85CA6NKD9 419 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 LGALS16A8MUM7 142 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 H0YCG3 227 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 K7ENM7 598 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 K7ERI5 159 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 EIF3DO15371 548 aaKnown RBP eCLIP10.86□□□□□ -0.67
DDB1-202ENST00000414411 CSDE1O75534 798 aaKnown RBP10.86□□□□□ -0.67
DDB1-202ENST00000414411 URI1O94763 535 aaPredicted RBP10.86□□□□□ -0.67
DDB1-202ENST00000414411 PRPF6O94906 941 aaKnown RBP10.86□□□□□ -0.67
DDB1-202ENST00000414411 GCNT3O95395 438 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 CASQ1P31415 396 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 ABCD1P33897 745 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 PHKA2P46019 1235 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 MBTD1Q05BQ5 628 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 BFSP2Q13515 415 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 MBTPS1Q14703 1052 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 AMHR2Q16671 573 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 FAM187BQ17R55 369 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 NOC3LQ8WTT2 800 aaKnown RBP10.86□□□□□ -0.67
DDB1-202ENST00000414411 OSMRQ99650 979 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 GCOM2Q9BZD3 368 aaPredicted RBP10.86□□□□□ -0.67
DDB1-202ENST00000414411 OSBPL7Q9BZF2 842 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 TBX20Q9UMR3 447 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 TRPV2Q9Y5S1 764 aa10.86□□□□□ -0.67
DDB1-202ENST00000414411 A0A1W2PQC6 194 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 EDN1P05305 212 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 CLTBP09497 229 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 PPP1R2P41236 205 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 UBXN1Q04323 297 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 GPNMBQ14956 572 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 ERCC6LQ2NKX8 1250 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 FBXO38Q6PIJ6 1188 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 STXBP4Q6ZWJ1 553 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 TMTC1Q8IUR5 882 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 MAP4K3Q8IVH8 894 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 ZBTB8OSQ8IWT0 167 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 MYOCDQ8IZQ8 938 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 HVCN1Q96D96 273 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 KCTD10Q9H3F6 313 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 GINS2Q9Y248 185 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 SQORQ9Y6N5 450 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 TET1Q8NFU7 2136 aa10.85□□□□□ -0.67
DDB1-202ENST00000414411 BICDL2A1A5D9 508 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 TTLL13PA6NNM8 815 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 INO80B-WBP1J3KQ70 363 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 M0QZ92 97 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 RNF225M0QZC1 329 aaPredicted RBP10.84□□□□□ -0.67
DDB1-202ENST00000414411 ACKR2O00590 384 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 KIAA0355O15063 1070 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 PIGRP01833 764 aa10.84□□□□□ -0.67
DDB1-202ENST00000414411 CTSHP09668 335 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms