RNA–Protein interactions for RNA: ENST00000413963.2

AP001888.1-201, humanhuman

BASIC

Gene AP001888.1, Length 720 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001888.1-201ENST00000413963 PAK1Q13153 545 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 NFIL3Q16649 462 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 EDRF1Q3B7T1 1238 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 ZSCAN23Q3MJ62 389 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 OTOP2Q7RTS6 562 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 ZBTB33Q86T24 672 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 NPAS4Q8IUM7 802 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 SLC9A9Q8IVB4 645 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 C12orf56Q8IXR9 622 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 PHOSPHO2Q8TCD6 241 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 P2RX5Q93086 422 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 CCDC94Q9BW85 323 aaPredicted RBP11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 UBE2OQ9C0C9 1292 aaKnown RBP11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 CDT1Q9H211 546 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 KCTD10Q9H3F6 313 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 AGPAT3Q9NRZ7 376 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 TMEM161AQ9NX61 479 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 AGO2Q9UKV8 859 aaKnown RBP11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 TRAF3IP3Q9Y228 551 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 MICAL3Q7RTP6 2002 aa11.69□□□□□ -0.54
AP001888.1-201ENST00000413963 ZMYM2Q9UBW7 1377 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 TET1Q8NFU7 2136 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 SYCE3A1L190 88 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 TTLL13PA6NNM8 815 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 PPP1R3GB7ZBB8 358 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 CAVIN2O95810 425 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 ITGA4P13612 1032 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 ERCC5P28715 1186 aaPredicted RBP11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 BMP8BP34820 402 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 GRM5P41594 1212 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 YARSP54577 528 aaKnown RBP11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 TYRO3Q06418 890 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 DPCR1Q3MIW9 517 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 UBXN11Q5T124 520 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 EEF1DP3Q658K8 133 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 KLHL10Q6JEL2 608 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 C16orf59Q7L2K0 433 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 MRPL10Q7Z7H8 261 aaKnown RBP11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 RTN4RL1Q86UN2 441 aaPredicted RBP11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 CDR2LQ86X02 465 aaPredicted RBP11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 ECHDC2Q86YB7 292 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 XXYLT1Q8NBI6 393 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 NELFBQ8WX92 580 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 VWCEQ96DN2 955 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 ZBTB45Q96K62 511 aaPredicted RBP11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 ACAP3Q96P50 834 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 SLC9A7Q96T83 725 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 GDF15Q99988 308 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 EIF2AQ9BY44 585 aaKnown RBP11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 TOPORSQ9NS56 1045 aaPredicted RBP11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 RWDD2AQ9UIY3 292 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 USP20Q9Y2K6 914 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 FRMD4BQ9Y2L6 1034 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 IPPQ9Y573 584 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 SLC4A7Q9Y6M7 1214 aa11.68□□□□□ -0.54
AP001888.1-201ENST00000413963 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 ABLIM1O14639 778 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 CETN3O15182 167 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 EXTL3O43909 919 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 EXOC3O60645 756 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 NR3C1P04150 777 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 CLTAP09496 248 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 HARSP12081 509 aaKnown RBP11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 CD44P16070 742 aaKnown RBP11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 NR2F2P24468 414 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 EPHB4P54760 987 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 WDR5P61964 334 aaKnown RBP11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 FKBP3Q00688 224 aaKnown RBP11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 TPD52L1Q16890 204 aaPredicted RBP11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 SLC39A4Q6P5W5 647 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 USP37Q86T82 979 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 THNSL1Q8IYQ7 743 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 ABI1Q8IZP0 508 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 GPD1LQ8N335 351 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 LINC01599Q8WXQ3 324 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 TOP1MTQ969P6 601 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 SEMA6BQ9H3T3 888 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 PLEKHA5Q9HAU0 1116 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 HSPBP1Q9NZL4 362 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 CTNND2Q9UQB3 1225 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 GIT1Q9Y2X7 761 aa11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.67□□□□□ -0.54
AP001888.1-201ENST00000413963 ZNF233A6NK53 670 aa11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 CLIC2O15247 247 aa11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 ADSSP30520 456 aa11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 CYP2J2P51589 502 aa11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 MAPK8IP2Q13387 824 aaPredicted RBP11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 ADAM9Q13443 819 aa11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 TCTN1Q2MV58 587 aa11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 ZCWPW2Q504Y3 356 aa11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 ANKRD40Q6AI12 368 aa11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 GLB1LQ6UWU2 654 aa11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 ZNF598Q86UK7 904 aaKnown RBP11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 CD302Q8IX05 232 aa11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 RNF169Q8NCN4 708 aa11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 SMG8Q8ND04 991 aaKnown RBP11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 URGCPQ8TCY9 931 aa11.66□□□□□ -0.54
AP001888.1-201ENST00000413963 RNPC3Q96LT9 517 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms