RNA–Protein interactions for RNA: ENST00000413658.6

ZNF3-205, Transcript of zinc finger protein 3, human

TSL 1 (best) BASIC

Gene ZNF3, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-205	ENST00000413658	ACCS	Q96QU6	501 aa		11.27	□□□□□ -0.6
ZNF3-205	ENST00000413658	EIF2A	Q9BY44	585 aa	Known RBP	11.27	□□□□□ -0.6
ZNF3-205	ENST00000413658	UBE2O	Q9C0C9	1292 aa	Known RBP	11.27	□□□□□ -0.6
ZNF3-205	ENST00000413658	METRN	Q9UJH8	293 aa		11.27	□□□□□ -0.6
ZNF3-205	ENST00000413658	TNFSF13B	Q9Y275	285 aa		11.27	□□□□□ -0.6
ZNF3-205	ENST00000413658	TDRD15	B5MCY1	1934 aa	Known RBP	11.27	□□□□□ -0.61
ZNF3-205	ENST00000413658	UBE4B	O95155	1302 aa		11.27	□□□□□ -0.61
ZNF3-205	ENST00000413658		A0A0U1RQF3	1178 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	ANKRD63	C9JTQ0	380 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	N4BP3	O15049	544 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	TGFB1I1	O43294	461 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	EFCAB14	O75071	495 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	ACTN1	P12814	892 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	PTMS	P20962	102 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	ADSS	P30520	456 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	COBLL1	Q53SF7	1204 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	SLC27A1	Q6PCB7	646 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	SLC24A5	Q71RS6	500 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	ZNF598	Q86UK7	904 aa	Known RBP	11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	SMG8	Q8ND04	991 aa	Known RBP	11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	FBXO22	Q8NEZ5	403 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	OCEL1	Q9H607	264 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	RMND1	Q9NWS8	449 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	STYXL1	Q9Y6J8	313 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	KIAA1671	Q9BY89	1806 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	BIN1	O00499	593 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	HNRNPDL	O14979	420 aa	Known RBP	11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	FAM189A1	O60320	539 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	ZNF623	O75123	536 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	TOM1L1	O75674	476 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	ZSCAN20	P17040	1043 aa	Predicted RBP	11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	PRCP	P42785	496 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	MCL1	Q07820	350 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	NCBP1	Q09161	790 aa	Known RBP	11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	CCDC183	Q5T5S1	534 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	ISM2	Q6H9L7	571 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	TWF2	Q6IBS0	349 aa	Known RBP	11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	MPZL3	Q6UWV2	235 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	STXBP4	Q6ZWJ1	553 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	MRPL10	Q7Z7H8	261 aa	Known RBP	11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	ECHDC2	Q86YB7	292 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	CCDC47	Q96A33	483 aa	Known RBP	11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	CDT1	Q9H211	546 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	KCTD10	Q9H3F6	313 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	C1orf112	Q9NSG2	853 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	FAM105A	Q9NUU6	356 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	RNF19A	Q9NV58	838 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658	PCDHB2	Q9Y5E7	798 aa		11.26	□□□□□ -0.61
ZNF3-205	ENST00000413658		A0A0B4J269	797 aa		11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	MEIS3P2	A8K0S8	358 aa		11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	PPP1R3G	B7ZBB8	358 aa		11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	NPTXR	O95502	500 aa		11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	LIG4	P49917	911 aa		11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	KNOP1	Q1ED39	458 aa	Known RBP	11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	NELFCD	Q8IXH7	590 aa		11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	MYOCD	Q8IZQ8	938 aa		11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	GUF1	Q8N442	669 aa	Known RBP	11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	TRIML1	Q8N9V2	468 aa		11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	TOP1MT	Q969P6	601 aa		11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	NXF3	Q9H4D5	531 aa	Known RBP	11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	ELAC1	Q9H777	363 aa	Known RBP	11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	TMEM206	Q9H813	350 aa		11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	MAPK8IP1	Q9UQF2	711 aa		11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	IPP	Q9Y573	584 aa		11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	SLC4A7	Q9Y6M7	1214 aa		11.25	□□□□□ -0.61
ZNF3-205	ENST00000413658	NLRC5	Q86WI3	1866 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	TRIOBP	Q9H2D6	2365 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	ZBBX	A8MT70	800 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	CLDN3	O15551	220 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	MEFV	O15553	781 aa	Predicted RBP	11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	EOMES	O95936	686 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	AMH	P03971	560 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	MCF2	P10911	925 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	KCNJ6	P48051	423 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	RAB27A	P51159	221 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	DCAF4L1	Q3SXM0	396 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	ZNF568	Q3ZCX4	644 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	ZCWPW2	Q504Y3	356 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	CAVIN1	Q6NZI2	390 aa	Known RBP	11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	AGMO	Q6ZNB7	445 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	ZBTB33	Q86T24	672 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	NPAS4	Q8IUM7	802 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	TMEM192	Q8IY95	271 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	TDH	Q8IZJ6	230 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	ADSSL1	Q8N142	457 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	CEP120	Q8N960	986 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	ZSWIM2	Q8NEG5	633 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	TMEM174	Q8WUU8	243 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	BICD1	Q96G01	975 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	RNPC3	Q96LT9	517 aa	Known RBP	11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	GTPBP4	Q9BZE4	634 aa	Known RBP	11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	GBP3	Q9H0R5	595 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	SEMA6B	Q9H3T3	888 aa		11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	RC3H2	Q9HBD1	1191 aa	Known RBP	11.24	□□□□□ -0.61
ZNF3-205	ENST00000413658	AGPAT3	Q9NRZ7	376 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms