RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 GRM5P41594 1212 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 NCKAP1LP55160 1127 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 SNRPFP62306 86 aaKnown RBP7.02□□□□□ -1.29
USP54-202ENST00000413442 ITIH3Q06033 890 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 DSC1Q08554 894 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 COASYQ13057 564 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 TUSC3Q13454 348 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 CAMK1Q14012 370 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 NBR1Q14596 966 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 STK38Q15208 465 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 ECM1Q16610 540 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 TMEM132AQ24JP5 1023 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 XKR4Q5GH76 650 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 TCEAL5Q5H9L2 206 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 ATF7IP2Q5U623 682 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 CNNM4Q6P4Q7 775 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 HAUS6Q7Z4H7 955 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 COLGALT2Q8IYK4 626 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 IQUBQ8NA54 791 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 RAD54LQ92698 747 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 CASP10Q92851 521 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 CCDC34Q96HJ3 373 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 NECTIN4Q96NY8 510 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 RPS6KC1Q96S38 1066 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 ACO2Q99798 780 aaKnown RBP7.02□□□□□ -1.29
USP54-202ENST00000413442 TCHPQ9BT92 498 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 EMILIN2Q9BXX0 1053 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 PARVGQ9HBI0 331 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 PTPRHQ9HD43 1115 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 MRPL17Q9NRX2 175 aaKnown RBP7.02□□□□□ -1.29
USP54-202ENST00000413442 DZANK1Q9NVP4 752 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 FNIP2Q9P278 1114 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 USP25Q9UHP3 1055 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 FBXO2Q9UK22 296 aaPredicted RBP7.02□□□□□ -1.29
USP54-202ENST00000413442 MAFFQ9ULX9 164 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 EXOC7Q9UPT5 735 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 PCDHB13Q9Y5F0 798 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 PRRC2BQ5JSZ5 2229 aaKnown RBP7.02□□□□□ -1.29
USP54-202ENST00000413442 COL4A4P53420 1690 aaPredicted RBP7.02□□□□□ -1.29
USP54-202ENST00000413442 PLXNA4Q9HCM2 1894 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 LAMA3Q16787 3333 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 SZT2Q5T011 3432 aa7.02□□□□□ -1.29
USP54-202ENST00000413442 MYH15Q9Y2K3 1946 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 GRXCR2A6NFK2 248 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 TMEM189-UBE2V1I3L0A0 370 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 TBCAO75347 108 aaKnown RBP7.01□□□□□ -1.29
USP54-202ENST00000413442 FAM13AO94988 1023 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 EFEMP2O95967 443 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 F13A1P00488 732 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 SOD2P04179 222 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 KRT18P05783 430 aaKnown RBP7.01□□□□□ -1.29
USP54-202ENST00000413442 KCNE1P15382 129 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 PROZP22891 400 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 CDC25AP30304 524 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 NUCB2P80303 420 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 GTF2BQ00403 316 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 HYAL1Q12794 435 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 MAPK7Q13164 816 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 KCNC3Q14003 757 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 DUSP6Q16828 381 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 USP41Q3LFD5 358 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 ARSHQ5FYA8 562 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 CES5AQ6NT32 575 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 DCLRE1AQ6PJP8 1040 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 MPZL3Q6UWV2 235 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 ALKAL1Q6UXT8 129 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 MAEAQ7L5Y9 396 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 NT5DC4Q86YG4 428 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 DAW1Q8N136 415 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 MYCT1Q8N699 235 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 TMEM161BQ8NDZ6 487 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 ZNF668Q96K58 619 aaPredicted RBP7.01□□□□□ -1.29
USP54-202ENST00000413442 ACAP3Q96P50 834 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 USP28Q96RU2 1077 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 TCF25Q9BQ70 676 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 SCAND2PQ9GZW5 306 aaPredicted RBP7.01□□□□□ -1.29
USP54-202ENST00000413442 TNMDQ9H2S6 317 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 PLEKHA4Q9H4M7 779 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 PDZD7Q9H5P4 517 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 TMEM206Q9H813 350 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 GPRC5CQ9NQ84 441 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 ENTPD7Q9NQZ7 604 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 OLFML3Q9NRN5 406 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 BLOC1S4Q9NUP1 217 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 CLDND1Q9NY35 253 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 FAM13BQ9NYF5 915 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 PARP2Q9UGN5 583 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 CD207Q9UJ71 328 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 RCOR1Q9UKL0 485 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 CLIC4Q9Y696 253 aa7.01□□□□□ -1.29
USP54-202ENST00000413442 MTCL1Q9Y4B5 1905 aaKnown RBP7.01□□□□□ -1.29
USP54-202ENST00000413442 CITO14578 2027 aa7□□□□□ -1.29
USP54-202ENST00000413442 A0A087WWV3 80 aa7□□□□□ -1.29
USP54-202ENST00000413442 PVALEFA0A1B0GWK0 134 aa7□□□□□ -1.29
USP54-202ENST00000413442 C2orf71A6NGG8 1288 aa7□□□□□ -1.29
USP54-202ENST00000413442 PP2D1A8MPX8 630 aa7□□□□□ -1.29
USP54-202ENST00000413442 TNFRSF10AO00220 468 aa7□□□□□ -1.29
USP54-202ENST00000413442 ZC3H11AO75152 810 aaKnown RBP eCLIP7□□□□□ -1.29
USP54-202ENST00000413442 TADA2AO75478 443 aa7□□□□□ -1.29
USP54-202ENST00000413442 DDHD2O94830 711 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms