RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 GRM6O15303 877 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 EIF3DO15371 548 aaKnown RBP eCLIP18.72■□□□□ 0.59
PTPRC-206ENST00000413409 RPS6P62753 249 aaKnown RBP18.72■□□□□ 0.59
PTPRC-206ENST00000413409 PTK7Q13308 1070 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 HIC1Q14526 733 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 MEA1Q16626 185 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 RINT1Q6NUQ1 792 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 TRIM65Q6PJ69 517 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 ZNF592Q92610 1267 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 TOP1MTQ969P6 601 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 YME1L1Q96TA2 773 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 FGFBP2Q9BYJ0 223 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 OSBPL7Q9BZF2 842 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 NDST4Q9H3R1 872 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 L2HGDHQ9H9P8 463 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 SEL1LQ9UBV2 794 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 CD207Q9UJ71 328 aa18.72■□□□□ 0.59
PTPRC-206ENST00000413409 CACNA1BQ00975 2339 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 CHMP2AO43633 222 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 LINC00271P0C7V0 271 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 ZBED6P86452 979 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 CACNB1Q02641 598 aaPredicted RBP18.71■□□□□ 0.59
PTPRC-206ENST00000413409 CTTNQ14247 550 aaKnown RBP18.71■□□□□ 0.59
PTPRC-206ENST00000413409 SYT10Q6XYQ8 523 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 RNF207Q6ZRF8 634 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 C1orf186Q6ZWK4 172 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 EDEM3Q9BZQ6 932 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 IGFLR1Q9H665 355 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 PXMP2Q9NR77 195 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 KCNH7Q9NS40 1196 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 TBC1D22BQ9NU19 505 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 ODF2LQ9ULJ1 636 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 TRAF3IP3Q9Y228 551 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 SIK3Q9Y2K2 1263 aa18.71■□□□□ 0.59
PTPRC-206ENST00000413409 NLRC5Q86WI3 1866 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 RNF225M0QZC1 329 aaPredicted RBP18.7■□□□□ 0.58
PTPRC-206ENST00000413409 RGS20O76081 388 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 UPP2O95045 317 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 LYPLA2O95372 231 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 TRIM21P19474 475 aaKnown RBP18.7■□□□□ 0.58
PTPRC-206ENST00000413409 GUCY2CP25092 1073 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 ZNF131P52739 623 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 MRPS9P82933 396 aaKnown RBP18.7■□□□□ 0.58
PTPRC-206ENST00000413409 CDK17Q00537 523 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 ARHGAP1Q07960 439 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 ADAM15Q13444 863 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 CBX2Q14781 532 aaPredicted RBP18.7■□□□□ 0.58
PTPRC-206ENST00000413409 MTF1Q14872 753 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 PGM5Q15124 567 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 NFIL3Q16649 462 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 TSR1Q2NL82 804 aaKnown RBP18.7■□□□□ 0.58
PTPRC-206ENST00000413409 TPH2Q8IWU9 490 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 MSLNLQ96KJ4 702 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 PDCD2LQ9BRP1 358 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 LXNQ9BS40 222 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 TBC1D7Q9P0N9 293 aa18.7■□□□□ 0.58
PTPRC-206ENST00000413409 EPG5Q9HCE0 2579 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.69■□□□□ 0.58
PTPRC-206ENST00000413409 PRR23AA6NEV1 266 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 PDXKO00764 312 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 DHX15O43143 795 aaKnown RBP18.69■□□□□ 0.58
PTPRC-206ENST00000413409 CALUO43852 315 aaPredicted RBP18.69■□□□□ 0.58
PTPRC-206ENST00000413409 FAM13AO94988 1023 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 PPP2R3AQ06190 1150 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 SIGLEC14Q08ET2 396 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 MTMR1Q13613 665 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 LY6KQ17RY6 165 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 KNOP1Q1ED39 458 aaKnown RBP18.69■□□□□ 0.58
PTPRC-206ENST00000413409 CCDC40Q4G0X9 1142 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 PLEKHG4Q58EX7 1191 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 MIER3Q7Z3K6 550 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 TRIM59Q8IWR1 403 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 C7orf31Q8N865 590 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 ZNF397Q8NF99 534 aaPredicted RBP18.69■□□□□ 0.58
PTPRC-206ENST00000413409 RDM1Q8NG50 284 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 TAAR1Q96RJ0 339 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 DESI2Q9BSY9 194 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 IRF2BPLQ9H1B7 796 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 ZHX3Q9H4I2 956 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 TYW1Q9NV66 732 aaKnown RBP18.69■□□□□ 0.58
PTPRC-206ENST00000413409 TRPC6Q9Y210 931 aa18.69■□□□□ 0.58
PTPRC-206ENST00000413409 C5orf67F2Z3F1 127 aa18.68■□□□□ 0.58
PTPRC-206ENST00000413409 CETN3O15182 167 aa18.68■□□□□ 0.58
PTPRC-206ENST00000413409 SLC16A3O15427 465 aaKnown RBP18.68■□□□□ 0.58
PTPRC-206ENST00000413409 P4HBP07237 508 aaKnown RBP18.68■□□□□ 0.58
PTPRC-206ENST00000413409 EIF2AK2P19525 551 aaKnown RBP18.68■□□□□ 0.58
PTPRC-206ENST00000413409 CCND2P30279 289 aa18.68■□□□□ 0.58
PTPRC-206ENST00000413409 PSEN2P49810 448 aa18.68■□□□□ 0.58
PTPRC-206ENST00000413409 RAD51AP2Q09MP3 1159 aa18.68■□□□□ 0.58
PTPRC-206ENST00000413409 ITGB3BPQ13352 177 aaPredicted RBP18.68■□□□□ 0.58
PTPRC-206ENST00000413409 STXBP4Q6ZWJ1 553 aa18.68■□□□□ 0.58
PTPRC-206ENST00000413409 NELFCDQ8IXH7 590 aa18.68■□□□□ 0.58
PTPRC-206ENST00000413409 RMDN3Q96TC7 470 aa18.68■□□□□ 0.58
PTPRC-206ENST00000413409 ZSWIM4Q9H7M6 989 aa18.68■□□□□ 0.58
PTPRC-206ENST00000413409 MRPL44Q9H9J2 332 aaKnown RBP18.68■□□□□ 0.58
PTPRC-206ENST00000413409 PARVGQ9HBI0 331 aa18.68■□□□□ 0.58
PTPRC-206ENST00000413409 ZNHIT6Q9NWK9 470 aaKnown RBP18.68■□□□□ 0.58
PTPRC-206ENST00000413409 DBR1Q9UK59 544 aaKnown RBP18.68■□□□□ 0.58
PTPRC-206ENST00000413409 ZNF292O60281 2723 aa18.67■□□□□ 0.58
PTPRC-206ENST00000413409 ARHGEF35A5YM69 484 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms