RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 TEX28O15482 410 aa21.31■■□□□ 1
CPSF7-204ENST00000413232 MYBP10242 640 aa21.31■■□□□ 1
CPSF7-204ENST00000413232 POTEGQ6S5H5 508 aa21.31■■□□□ 1
CPSF7-204ENST00000413232 CCDC43Q96MW1 224 aaKnown RBP21.31■■□□□ 1
CPSF7-204ENST00000413232 RPS6KC1Q96S38 1066 aa21.31■■□□□ 1
CPSF7-204ENST00000413232 KIF2CQ99661 725 aa21.31■■□□□ 1
CPSF7-204ENST00000413232 CXCL16Q9H2A7 254 aa21.31■■□□□ 1
CPSF7-204ENST00000413232 SFXN1Q9H9B4 322 aa21.31■■□□□ 1
CPSF7-204ENST00000413232 TUFT1Q9NNX1 390 aa21.31■■□□□ 1
CPSF7-204ENST00000413232 SORCS3Q9UPU3 1222 aa21.31■■□□□ 1
CPSF7-204ENST00000413232 GIT1Q9Y2X7 761 aa21.31■■□□□ 1
CPSF7-204ENST00000413232 USP34Q70CQ2 3546 aa21.31■■□□□ 1
CPSF7-204ENST00000413232 LRRIQ4A6NIV6 560 aa21.3■■□□□ 1
CPSF7-204ENST00000413232 EDN1P05305 212 aa21.3■■□□□ 1
CPSF7-204ENST00000413232 AVPR2P30518 371 aa21.3■■□□□ 1
CPSF7-204ENST00000413232 NCBP1Q09161 790 aaKnown RBP21.3■■□□□ 1
CPSF7-204ENST00000413232 ECM1Q16610 540 aa21.3■■□□□ 1
CPSF7-204ENST00000413232 ZDHHC14Q8IZN3 488 aa21.3■■□□□ 1
CPSF7-204ENST00000413232 C8orf76Q96K31 380 aa21.3■■□□□ 1
CPSF7-204ENST00000413232 POLR3CQ9BUI4 534 aaPredicted RBP21.3■■□□□ 1
CPSF7-204ENST00000413232 GPR62Q9BZJ7 368 aa21.3■■□□□ 1
CPSF7-204ENST00000413232 TRIM6Q9C030 488 aaPredicted RBP21.3■■□□□ 1
CPSF7-204ENST00000413232 POLD4Q9HCU8 107 aa21.3■■□□□ 1
CPSF7-204ENST00000413232 VWA8A3KMH1 1905 aa21.29■■□□□ 1
CPSF7-204ENST00000413232 URODP06132 367 aa21.29■■□□□ 1
CPSF7-204ENST00000413232 NBR1Q14596 966 aa21.29■■□□□ 1
CPSF7-204ENST00000413232 CDCA2Q69YH5 1023 aaPredicted RBP21.29■■□□□ 1
CPSF7-204ENST00000413232 SLC27A1Q6PCB7 646 aa21.29■■□□□ 1
CPSF7-204ENST00000413232 TDRD5Q8NAT2 981 aaKnown RBP21.29■■□□□ 1
CPSF7-204ENST00000413232 PAAF1Q9BRP4 392 aa21.29■■□□□ 1
CPSF7-204ENST00000413232 FZD8Q9H461 694 aa21.29■■□□□ 1
CPSF7-204ENST00000413232 CHST7Q9NS84 486 aa21.29■■□□□ 1
CPSF7-204ENST00000413232 STK39Q9UEW8 545 aa21.29■■□□□ 1
CPSF7-204ENST00000413232 USTQ9Y2C2 406 aa21.29■■□□□ 1
CPSF7-204ENST00000413232 OR52Z1P0C646 297 aa21.28■■□□□ 1
CPSF7-204ENST00000413232 RPA1P27694 616 aa21.28■■□□□ 1
CPSF7-204ENST00000413232 GLUD2P49448 558 aa21.28■■□□□ 1
CPSF7-204ENST00000413232 DSG1Q02413 1049 aa21.28■■□□□ 1
CPSF7-204ENST00000413232 MTMR3Q13615 1198 aa21.28■■□□□ 1
CPSF7-204ENST00000413232 SAFBQ15424 915 aaKnown RBP eCLIP21.28■■□□□ 1
CPSF7-204ENST00000413232 PPP4R3CPQ6ZMV5 832 aa21.28■■□□□ 1
CPSF7-204ENST00000413232 C4orf32Q8N8J7 132 aa21.28■■□□□ 1
CPSF7-204ENST00000413232 FBXO18Q8NFZ0 1043 aa21.28■■□□□ 1
CPSF7-204ENST00000413232 NACC1Q96RE7 527 aa21.28■■□□□ 1
CPSF7-204ENST00000413232 FOXP1Q9H334 677 aaPredicted RBP21.28■■□□□ 1
CPSF7-204ENST00000413232 RXFP1Q9HBX9 757 aa21.28■■□□□ 1
CPSF7-204ENST00000413232 MAN1C1Q9NR34 630 aa21.28■■□□□ 1
CPSF7-204ENST00000413232 PARP2Q9UGN5 583 aa21.28■■□□□ 1
CPSF7-204ENST00000413232 N4BP1O75113 896 aaKnown RBP21.27■■□□□ 1
CPSF7-204ENST00000413232 SPATA31D3P0C874 917 aa21.27■■□□□ 1
CPSF7-204ENST00000413232 PADI6Q6TGC4 694 aa21.27■■□□□ 1
CPSF7-204ENST00000413232 SPATA31D4Q6ZUB0 917 aa21.27■■□□□ 1
CPSF7-204ENST00000413232 UBALD2Q8IYN6 164 aa21.27■■□□□ 1
CPSF7-204ENST00000413232 MCPH1Q8NEM0 835 aa21.27■■□□□ 1
CPSF7-204ENST00000413232 LLPHQ9BRT6 129 aaKnown RBP21.27■■□□□ 1
CPSF7-204ENST00000413232 PDZD7Q9H5P4 517 aa21.27■■□□□ 1
CPSF7-204ENST00000413232 RFPL2O75678 378 aa21.26■□□□□ 0.99
CPSF7-204ENST00000413232 CYP11B2P19099 503 aa21.26■□□□□ 0.99
CPSF7-204ENST00000413232 FAM187BQ17R55 369 aa21.26■□□□□ 0.99
CPSF7-204ENST00000413232 TTC38Q5R3I4 469 aa21.26■□□□□ 0.99
CPSF7-204ENST00000413232 FUT10Q6P4F1 479 aa21.26■□□□□ 0.99
CPSF7-204ENST00000413232 PLCD3Q8N3E9 789 aa21.26■□□□□ 0.99
CPSF7-204ENST00000413232 COLEC11Q9BWP8 271 aa21.26■□□□□ 0.99
CPSF7-204ENST00000413232 CCDC113Q9H0I3 377 aa21.26■□□□□ 0.99
CPSF7-204ENST00000413232 PRMT7Q9NVM4 692 aaPredicted RBP21.26■□□□□ 0.99
CPSF7-204ENST00000413232 CCDC195A0A1B0GUA6 201 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 SPDYE4A6NLX3 237 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 PTGESO14684 152 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 ADH1AP07327 375 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 RPL17P18621 184 aaKnown RBP21.25■□□□□ 0.99
CPSF7-204ENST00000413232 TOB1P50616 345 aaPredicted RBP21.25■□□□□ 0.99
CPSF7-204ENST00000413232 PTPN5P54829 565 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 GRIK3Q13003 919 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 EEF1DP3Q658K8 133 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 C15orf39Q6ZRI6 1047 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 CCDC149Q6ZUS6 474 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 PALB2Q86YC2 1186 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 GLYCTKQ8IVS8 523 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 HACE1Q8IYU2 909 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 PRIMPOLQ96LW4 560 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 KIFC3Q9BVG8 833 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 SNTG2Q9NY99 539 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 ADAM28Q9UKQ2 775 aa21.25■□□□□ 0.99
CPSF7-204ENST00000413232 GLUD1P00367 558 aa21.24■□□□□ 0.99
CPSF7-204ENST00000413232 IGFBP6P24592 240 aaPredicted RBP21.24■□□□□ 0.99
CPSF7-204ENST00000413232 NOSTRINQ8IVI9 506 aa21.24■□□□□ 0.99
CPSF7-204ENST00000413232 TMEM105Q8N8V8 129 aa21.24■□□□□ 0.99
CPSF7-204ENST00000413232 CMASQ8NFW8 434 aaPredicted RBP21.24■□□□□ 0.99
CPSF7-204ENST00000413232 ZNF707Q96C28 371 aaPredicted RBP21.24■□□□□ 0.99
CPSF7-204ENST00000413232 FAM86C1Q9NVL1 165 aa21.24■□□□□ 0.99
CPSF7-204ENST00000413232 SSX2IPQ9Y2D8 614 aa21.24■□□□□ 0.99
CPSF7-204ENST00000413232 MYO15AQ9UKN7 3530 aa21.24■□□□□ 0.99
CPSF7-204ENST00000413232 ARHGEF35A5YM69 484 aa21.23■□□□□ 0.99
CPSF7-204ENST00000413232 CASTOR2A6NHX0 329 aa21.23■□□□□ 0.99
CPSF7-204ENST00000413232 TGM5O43548 720 aa21.23■□□□□ 0.99
CPSF7-204ENST00000413232 NR1I2O75469 434 aa21.23■□□□□ 0.99
CPSF7-204ENST00000413232 PRKCBP05771 671 aa21.23■□□□□ 0.99
CPSF7-204ENST00000413232 LIG1P18858 919 aa21.23■□□□□ 0.99
CPSF7-204ENST00000413232 RBM25P49756 843 aaKnown RBP21.23■□□□□ 0.99
CPSF7-204ENST00000413232 ORC2Q13416 577 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms