RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 KLHL40Q2TBA0 621 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 RRP12Q5JTH9 1297 aaKnown RBP6.14□□□□□ -1.43
LINC00342-201ENST00000412393 PRAMEF19Q5SWL8 479 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 ANO1Q5XXA6 986 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 TTBK2Q6IQ55 1244 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 ZNF589Q86UQ0 364 aaPredicted RBP6.14□□□□□ -1.43
LINC00342-201ENST00000412393 C7orf61Q8IZ16 206 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 ZDHHC14Q8IZN3 488 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 TRPV1Q8NER1 839 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 CHURC1Q8WUH1 139 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 CYB5D2Q8WUJ1 264 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 DDX11Q96FC9 970 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 MAML3Q96JK9 1138 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 NAP1L5Q96NT1 182 aaPredicted RBP6.14□□□□□ -1.43
LINC00342-201ENST00000412393 CNTD2Q9H8S5 307 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 RAVER2Q9HCJ3 691 aaKnown RBP6.14□□□□□ -1.43
LINC00342-201ENST00000412393 IL17RBQ9NRM6 502 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 DIAPH3Q9NSV4 1193 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 NOL7Q9UMY1 257 aaKnown RBP6.14□□□□□ -1.43
LINC00342-201ENST00000412393 DIS3Q9Y2L1 958 aaKnown RBP6.14□□□□□ -1.43
LINC00342-201ENST00000412393 RIPK3Q9Y572 518 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 ZMYM6O95789 1325 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 TMEM232C9JQI7 657 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 HIP1O00291 1037 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 ATP2A1O14983 1001 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 SEPT4O43236 478 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 NRDCO43847 1150 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 NMT2O60551 498 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 PCP11498 1178 aaKnown RBP6.13□□□□□ -1.43
LINC00342-201ENST00000412393 COL6A1P12109 1028 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 PDIA4P13667 645 aaKnown RBP6.13□□□□□ -1.43
LINC00342-201ENST00000412393 MCCP23508 829 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 SLC1A4P43007 532 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 STAT2P52630 851 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 IKQ13123 557 aaPredicted RBP6.13□□□□□ -1.43
LINC00342-201ENST00000412393 BMP2KLQ5H9B9 411 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 ZFYVE27Q5T4F4 411 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 ALG1LQ6GMV1 187 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 RCSD1Q6JBY9 416 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 CWC27Q6UX04 472 aaKnown RBP6.13□□□□□ -1.43
LINC00342-201ENST00000412393 KCTD1Q719H9 257 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 FAM160B2Q86V87 743 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 FAM129CQ86XR2 697 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 ARRDC4Q8NCT1 418 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 ENOX1Q8TC92 643 aaKnown RBP6.13□□□□□ -1.43
LINC00342-201ENST00000412393 MZB1Q8WU39 189 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 STAG1Q8WVM7 1258 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 CHMP4CQ96CF2 233 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 GPR20Q99678 358 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 DPH2Q9BQC3 489 aaPredicted RBP6.13□□□□□ -1.43
LINC00342-201ENST00000412393 TINF2Q9BSI4 451 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 PANK2Q9BZ23 570 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 OSBPL7Q9BZF2 842 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 SLKQ9H2G2 1235 aaPredicted RBP6.13□□□□□ -1.43
LINC00342-201ENST00000412393 SLC38A10Q9HBR0 1119 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 FBXO40Q9UH90 709 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 PRDM4Q9UKN5 801 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 ZMYND8Q9ULU4 1186 aaPredicted RBP6.13□□□□□ -1.43
LINC00342-201ENST00000412393 PFASO15067 1338 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 LCTP09848 1927 aa6.13□□□□□ -1.43
LINC00342-201ENST00000412393 KBTBD13C9JR72 458 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 DNM1LO00429 736 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 DYNC1I1O14576 645 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 ZNF213O14771 459 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 PLA2G6O60733 806 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 TOP1P11387 765 aaKnown RBP6.12□□□□□ -1.43
LINC00342-201ENST00000412393 INSRRP14616 1297 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 PNLIPP16233 465 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 VIPR1P32241 457 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 NOVP48745 357 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 FXR1P51114 621 aaKnown RBP eCLIP6.12□□□□□ -1.43
LINC00342-201ENST00000412393 OAZ1P54368 228 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 EPHB3P54753 998 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 LRRC26Q2I0M4 334 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 CCDC96Q2M329 555 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 AKNAD1Q5T1N1 836 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 GJC2Q5T442 439 aaPredicted RBP6.12□□□□□ -1.43
LINC00342-201ENST00000412393 UTP14CQ5TAP6 766 aaKnown RBP6.12□□□□□ -1.43
LINC00342-201ENST00000412393 RNF111Q6ZNA4 994 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 MFSD6Q6ZSS7 791 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 RASGRP2Q7LDG7 609 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 TBC1D10CQ8IV04 446 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 HSCBQ8IWL3 235 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 SMAP1Q8IYB5 467 aaPredicted RBP6.12□□□□□ -1.43
LINC00342-201ENST00000412393 ANKRD35Q8N283 1001 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 CHST13Q8NET6 341 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 DCAF4Q8WV16 495 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 TNPO1Q92973 898 aaKnown RBP6.12□□□□□ -1.43
LINC00342-201ENST00000412393 TRIM44Q96DX7 344 aaPredicted RBP6.12□□□□□ -1.43
LINC00342-201ENST00000412393 G6PC3Q9BUM1 346 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 BDH2Q9BUT1 245 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 ASPNQ9BXN1 380 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 SENP6Q9GZR1 1112 aaPredicted RBP6.12□□□□□ -1.43
LINC00342-201ENST00000412393 PRO3102Q9H379 93 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 RNF41Q9H4P4 317 aaPredicted RBP6.12□□□□□ -1.43
LINC00342-201ENST00000412393 RNF146Q9NTX7 359 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 TCP11L1Q9NUJ3 509 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 NRBP1Q9UHY1 535 aa6.12□□□□□ -1.43
LINC00342-201ENST00000412393 LRRC37A2A6NM11 1700 aa6.11□□□□□ -1.43
LINC00342-201ENST00000412393 ZNF536O15090 1300 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms