RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 B3GALT6Q96L58 329 aa12.81□□□□□ -0.36
LINC00963-201ENST00000412141 TBC1D32Q96NH3 1257 aa12.81□□□□□ -0.36
LINC00963-201ENST00000412141 TMEM175Q9BSA9 504 aa12.81□□□□□ -0.36
LINC00963-201ENST00000412141 NFKBIZQ9BYH8 718 aa12.81□□□□□ -0.36
LINC00963-201ENST00000412141 FZD8Q9H461 694 aa12.81□□□□□ -0.36
LINC00963-201ENST00000412141 PDZD7Q9H5P4 517 aa12.81□□□□□ -0.36
LINC00963-201ENST00000412141 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.81□□□□□ -0.36
LINC00963-201ENST00000412141 SNTG2Q9NY99 539 aa12.81□□□□□ -0.36
LINC00963-201ENST00000412141 DNM3Q9UQ16 869 aa12.81□□□□□ -0.36
LINC00963-201ENST00000412141 GDAQ9Y2T3 454 aa12.81□□□□□ -0.36
LINC00963-201ENST00000412141 GIT1Q9Y2X7 761 aa12.81□□□□□ -0.36
LINC00963-201ENST00000412141 WDFY4Q6ZS81 3184 aa12.81□□□□□ -0.36
LINC00963-201ENST00000412141 VWA3AA6NCI4 1184 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 SFI1A8K8P3 1242 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 PRR33A8MZF0 331 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 NR1I2O75469 434 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 EDN1P05305 212 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 CNPP09543 421 aaKnown RBP12.8□□□□□ -0.36
LINC00963-201ENST00000412141 HOXB8P17481 243 aaPredicted RBP12.8□□□□□ -0.36
LINC00963-201ENST00000412141 HOXD11P31277 338 aaPredicted RBP12.8□□□□□ -0.36
LINC00963-201ENST00000412141 NAMPTP43490 491 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 PEX3P56589 373 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 RILPL1Q5EBL4 403 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 CDCA2Q69YH5 1023 aaPredicted RBP12.8□□□□□ -0.36
LINC00963-201ENST00000412141 KIAA1841Q6NSI8 718 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 CES5AQ6NT32 575 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 TMC5Q6UXY8 1006 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 KCNK18Q7Z418 384 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 CABP7Q86V35 215 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 GLYCTKQ8IVS8 523 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 KLHL5Q96PQ7 755 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 RPS6KC1Q96S38 1066 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 RUSC1Q9BVN2 902 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 C2orf40Q9H1Z8 148 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 CXCL16Q9H2A7 254 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 MARCH5Q9NX47 278 aa12.8□□□□□ -0.36
LINC00963-201ENST00000412141 CARNS1A5YM72 827 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 LOC730098B7Z3J9 87 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 ACKR2O00590 384 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 N4BP3O15049 544 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 HIP1RO75146 1068 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 RECQL4O94761 1208 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 URODP06132 367 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 SPATA31D3P0C874 917 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 MCM2P49736 904 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 DSC1Q08554 894 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 PPP2R5AQ15172 486 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 SPATA31D4Q6ZUB0 917 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 ZBTB33Q86T24 672 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 GSTCDQ8NEC7 633 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 HASPINQ8TF76 798 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 SLC22A17Q8WUG5 538 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 KIFAP3Q92845 792 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 PRIMPOLQ96LW4 560 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 MMTAG2Q9BU76 263 aaKnown RBP12.79□□□□□ -0.36
LINC00963-201ENST00000412141 COLEC11Q9BWP8 271 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 EMILIN2Q9BXX0 1053 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 ADAM7Q9H2U9 754 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 POMKQ9H5K3 350 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 MRPL17Q9NRX2 175 aaKnown RBP12.79□□□□□ -0.36
LINC00963-201ENST00000412141 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.79□□□□□ -0.36
LINC00963-201ENST00000412141 MUC6Q6W4X9 2439 aa12.79□□□□□ -0.36
LINC00963-201ENST00000412141 VPS37CA5D8V6 355 aaPredicted RBP12.78□□□□□ -0.36
LINC00963-201ENST00000412141 CASTOR2A6NHX0 329 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 K7ERI5 159 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 LAD1O00515 517 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 TADA2AO75478 443 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 SOD2P04179 222 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 MUTP22033 750 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 PRPHP41219 470 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 ATP2C1P98194 919 aaPredicted RBP12.78□□□□□ -0.36
LINC00963-201ENST00000412141 GIT2Q14161 759 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 DHX8Q14562 1220 aaKnown RBP12.78□□□□□ -0.36
LINC00963-201ENST00000412141 FAM187BQ17R55 369 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 NT5DC1Q5TFE4 455 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 ATF7IP2Q5U623 682 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 PALB2Q86YC2 1186 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 DAW1Q8N136 415 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 CDK5RAP3Q96JB5 506 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 FBXL18Q96ME1 805 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 PAAF1Q9BRP4 392 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 ADPGKQ9BRR6 497 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 CCDC113Q9H0I3 377 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 FOXD4L1Q9NU39 408 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 IRAK3Q9Y616 596 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 STK24Q9Y6E0 443 aa12.78□□□□□ -0.36
LINC00963-201ENST00000412141 ZDBF2Q9HCK1 2354 aa12.77□□□□□ -0.36
LINC00963-201ENST00000412141 NPHP3-ACAD11A0A0J9YXS1 232 aa12.77□□□□□ -0.37
LINC00963-201ENST00000412141 INPPL1O15357 1258 aa12.77□□□□□ -0.37
LINC00963-201ENST00000412141 LILRB3O75022 631 aa12.77□□□□□ -0.37
LINC00963-201ENST00000412141 HARSP12081 509 aaKnown RBP12.77□□□□□ -0.37
LINC00963-201ENST00000412141 RPL17P18621 184 aaKnown RBP12.77□□□□□ -0.37
LINC00963-201ENST00000412141 NPTX2P47972 431 aa12.77□□□□□ -0.37
LINC00963-201ENST00000412141 GLUD2P49448 558 aa12.77□□□□□ -0.37
LINC00963-201ENST00000412141 EFNA5P52803 228 aa12.77□□□□□ -0.37
LINC00963-201ENST00000412141 OSTNP61366 133 aa12.77□□□□□ -0.37
LINC00963-201ENST00000412141 CACNB1Q02641 598 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-201ENST00000412141 ITIH3Q06033 890 aa12.77□□□□□ -0.37
LINC00963-201ENST00000412141 GRIK3Q13003 919 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms