RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ENOX2Q16206 610 aaKnown RBP14.67□□□□□ -0.06
LIMS1-205ENST00000410093 CCNI2Q6ZMN8 369 aaPredicted RBP14.67□□□□□ -0.06
LIMS1-205ENST00000410093 RDH13Q8NBN7 331 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 FBXL13Q8NEE6 735 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 COG1Q8WTW3 980 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 U2AF1L4Q8WU68 220 aaKnown RBP14.67□□□□□ -0.06
LIMS1-205ENST00000410093 POMGNT1Q8WZA1 660 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 TMEM117Q9H0C3 514 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 PORCNQ9H237 461 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 UBE2TQ9NPD8 197 aaPredicted RBP14.67□□□□□ -0.06
LIMS1-205ENST00000410093 GPRC5CQ9NQ84 441 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 AGTPBP1Q9UPW5 1226 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 LRRC37A2A6NM11 1700 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 CASP8AP2Q9UKL3 1982 aa14.67□□□□□ -0.06
LIMS1-205ENST00000410093 CCDC188H7C350 402 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 HNRNPDLO14979 420 aaKnown RBP14.66□□□□□ -0.06
LIMS1-205ENST00000410093 EXTL3O43909 919 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 ADSSP30520 456 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 GALCP54803 685 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 CYP24A1Q07973 514 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 NNTQ13423 1086 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 CASP8Q14790 479 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 HSP90B2PQ58FF3 399 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 C1orf220Q5T0J3 134 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 PPP1R2P3Q6NXS1 205 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 EMBQ6PCB8 327 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 PEX26Q7Z412 305 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 IFNL1Q8IU54 200 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 IFT20Q8IY31 132 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 FAM71AQ8IYT1 594 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 NT5C1BQ96P26 610 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 NAP1L3Q99457 506 aaPredicted RBP14.66□□□□□ -0.06
LIMS1-205ENST00000410093 JPH2Q9BR39 696 aaPredicted RBP14.66□□□□□ -0.06
LIMS1-205ENST00000410093 PACSIN1Q9BY11 444 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 POLR3FQ9H1D9 316 aaPredicted RBP14.66□□□□□ -0.06
LIMS1-205ENST00000410093 ISCUQ9H1K1 167 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 IKZF4Q9H2S9 585 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 MROH8Q9H579 483 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 XPNPEP1Q9NQW7 623 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 STIM2Q9P246 746 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 AJAP1Q9UKB5 411 aaPredicted RBP14.66□□□□□ -0.06
LIMS1-205ENST00000410093 TTC7AQ9ULT0 858 aaPredicted RBP14.66□□□□□ -0.06
LIMS1-205ENST00000410093 RTN2O75298 545 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 SASH3O75995 380 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 ARL2P36404 184 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 GCLMP48507 274 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 SLC26A2P50443 739 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 GTF2A2P52657 109 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 EFNA5P52803 228 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 AP3M2P53677 418 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 GCNT1Q02742 428 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 TREML2Q5T2D2 321 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 C8orf74Q6P047 294 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 GJB7Q6PEY0 223 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 METTL7BQ6UX53 244 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 LNX1Q8TBB1 728 aaPredicted RBP14.66□□□□□ -0.06
LIMS1-205ENST00000410093 TCP11Q8WWU5 503 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 SEPT1Q8WYJ6 367 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 SHC3Q92529 594 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 OTUD5Q96G74 571 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 MCOLN1Q9GZU1 580 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 AMFRQ9UKV5 643 aa14.66□□□□□ -0.06
LIMS1-205ENST00000410093 CCDC85CA6NKD9 419 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 ANKRD63C9JTQ0 380 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 GPR25O00155 361 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 FOXN3O00409 490 aaPredicted RBP14.65□□□□□ -0.06
LIMS1-205ENST00000410093 TFRCP02786 760 aaKnown RBP14.65□□□□□ -0.06
LIMS1-205ENST00000410093 LIG4P49917 911 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 EPHB4P54760 987 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 BPIFB4P59827 614 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 DLG4P78352 724 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 C2orf54Q08AI8 447 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 PSMD6Q15008 389 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 ARHGAP44Q17R89 818 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 GADL1Q6ZQY3 521 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 CYFIP1Q7L576 1253 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 ZNF677Q86XU0 584 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 GLYCTKQ8IVS8 523 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 SHCBP1Q8NEM2 672 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 BICD1Q96G01 975 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 RAB20Q9NX57 234 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 BTBD7Q9P203 1132 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 TMEM59LQ9UK28 342 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 STXBP5LQ9Y2K9 1186 aa14.65□□□□□ -0.06
LIMS1-205ENST00000410093 TMEM150BA6NC51 233 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 MIF4GDA9UHW6 222 aaKnown RBP14.64□□□□□ -0.07
LIMS1-205ENST00000410093 FKTNO75072 461 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 MTA2O94776 668 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 FARP2O94887 1054 aaPredicted RBP14.64□□□□□ -0.07
LIMS1-205ENST00000410093 FTCDO95954 541 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 ADRB2P07550 413 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 AARSP49588 968 aaKnown RBP eCLIP14.64□□□□□ -0.07
LIMS1-205ENST00000410093 TERF2Q15554 542 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 MTERF2Q49AM1 385 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 C11orf63Q6NUN7 778 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 PLPPR4Q7Z2D5 763 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 CTU1Q7Z7A3 348 aaKnown RBP14.64□□□□□ -0.07
LIMS1-205ENST00000410093 NCAPG2Q86XI2 1143 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 CBWD2Q8IUF1 395 aa14.64□□□□□ -0.07
LIMS1-205ENST00000410093 RASGEF1CQ8N431 466 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms