RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 RBM6P78332 1123 aaKnown RBP11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 ALCAMQ13740 583 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 OSBP2Q969R2 916 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 PAPOLBQ9NRJ5 636 aaKnown RBP11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 SSH2Q76I76 1423 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 KPNA7A9QM74 516 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 E9PMD0 336 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 RASGRF1Q13972 1273 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 CEP70Q8NHQ1 597 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 CPVLQ9H3G5 476 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 ADGRL2O95490 1459 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 NMT2O60551 498 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 MMP1P03956 469 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 CYP21A2P08686 494 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 GPS1Q13098 491 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 SMIM5Q71RC9 77 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 ZC3H18Q86VM9 953 aaKnown RBP11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 STAP1Q9ULZ2 295 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 SRPRBQ9Y5M8 271 aaKnown RBP11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 TTLL13PA6NNM8 815 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 ATXN3P54252 364 aaPredicted RBP11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 SAAL1Q96ER3 474 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 NUP85Q9BW27 656 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 NEO1Q92859 1461 aa11.88□□□□□ -0.51
PRPF40A-202ENST00000410080 CCDC78A2IDD5 438 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 CYTH3O43739 400 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 SLFN14P0C7P3 912 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 WEE1P30291 646 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 GCLMP48507 274 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 AIFM3Q96NN9 605 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 KDM6BO15054 1643 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 MYO1GB0I1T2 1018 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 SKIP12755 728 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 ZNF445P59923 1031 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 PWP1Q13610 501 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 HAUS6Q7Z4H7 955 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 DCAF4Q8WV16 495 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 DYDC2Q96IM9 177 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 YME1L1Q96TA2 773 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 ZNF556Q9HAH1 456 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 FAM32AQ9Y421 112 aaKnown RBP11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 SOWAHDA6NJG2 315 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 PDGFRBP09619 1106 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 MTMR2Q13614 643 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 IRAK1BP1Q5VVH5 260 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 AURKCQ9UQB9 309 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 RGS12O14924 1447 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 USP6P35125 1406 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 ITSN1Q15811 1721 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 SPTLC1O15269 473 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 PYGBP11216 843 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 PBLDP30039 288 aaPredicted RBP11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 POLE2P56282 527 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 OCA2Q04671 838 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 C2orf40Q9H1Z8 148 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 HSPBP1Q9NZL4 362 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 PCDHB6Q9Y5E3 794 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 CALB1P05937 261 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 APOL1O14791 398 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 GYG2O15488 501 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 MLNP12872 115 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 ERAP2Q6P179 960 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 KATNAL1Q9BW62 490 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 NRBP1Q9UHY1 535 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 SEC24DO94855 1032 aaPredicted RBP11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 ERVK-10P10266 1014 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 CDK17Q00537 523 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 MAP3K10Q02779 954 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 PLCL1Q15111 1095 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 ALKBH2Q6NS38 261 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 RNF26Q9BY78 433 aaPredicted RBP11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 BSDC1Q9NW68 430 aaPredicted RBP11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 FBXO40Q9UH90 709 aa11.87□□□□□ -0.51
PRPF40A-202ENST00000410080 SNAP23O00161 211 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 IPO5O00410 1097 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 ADCY3O60266 1144 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 DEUP1Q05D60 604 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 PRR23CQ6ZRP0 262 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 LATS2Q9NRM7 1088 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 KRT4P19013 534 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 ATP6V1C1P21283 382 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 EIF4A3P38919 411 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 FGD2Q7Z6J4 655 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 JADE3Q92613 823 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 CYP4F11Q9HBI6 524 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 RNF146Q9NTX7 359 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 RBAKQ9NYW8 714 aaPredicted RBP11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 MYH3P11055 1940 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 RNF103-CHMP3A0A140T963 221 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 NBNO60934 754 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 TADA3O75528 432 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 SDC4P31431 198 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 SREBF2Q12772 1141 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 EIF2B5Q13144 721 aaKnown RBP11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 FAM161BQ96MY7 647 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 ANKARQ7Z5J8 1434 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 SUPT3HO75486 399 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 CYP2B6P20813 491 aa11.86□□□□□ -0.51
PRPF40A-202ENST00000410080 ALDH7A1P49419 539 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms