RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 CAVIN2O95810 425 aa16.63■□□□□ 0.25
LSM5-207ENST00000410044 LDHAP00338 332 aaKnown RBP16.63■□□□□ 0.25
LSM5-207ENST00000410044 FGBP02675 491 aa16.63■□□□□ 0.25
LSM5-207ENST00000410044 RAB27AP51159 221 aa16.63■□□□□ 0.25
LSM5-207ENST00000410044 KYAT1Q16773 422 aa16.63■□□□□ 0.25
LSM5-207ENST00000410044 TWF2Q6IBS0 349 aaKnown RBP16.63■□□□□ 0.25
LSM5-207ENST00000410044 LRSAM1Q6UWE0 723 aa16.63■□□□□ 0.25
LSM5-207ENST00000410044 CRIPAKQ8N1N5 446 aa16.63■□□□□ 0.25
LSM5-207ENST00000410044 LINC01599Q8WXQ3 324 aa16.63■□□□□ 0.25
LSM5-207ENST00000410044 FBXL18Q96ME1 805 aa16.63■□□□□ 0.25
LSM5-207ENST00000410044 DUSP9Q99956 384 aaKnown RBP16.63■□□□□ 0.25
LSM5-207ENST00000410044 BPIFA3Q9BQP9 254 aa16.63■□□□□ 0.25
LSM5-207ENST00000410044 TCHPQ9BT92 498 aa16.63■□□□□ 0.25
LSM5-207ENST00000410044 ELAC1Q9H777 363 aaKnown RBP16.63■□□□□ 0.25
LSM5-207ENST00000410044 FAM105AQ9NUU6 356 aa16.63■□□□□ 0.25
LSM5-207ENST00000410044 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.62■□□□□ 0.25
LSM5-207ENST00000410044 CLIC2O15247 247 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 OGTO15294 1046 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 EOMESO95936 686 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 ACRP10323 421 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 ACTN1P12814 892 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 RPL13P26373 211 aaKnown RBP16.62■□□□□ 0.25
LSM5-207ENST00000410044 EPHB4P54760 987 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 MCCD1P59942 119 aaPredicted RBP16.62■□□□□ 0.25
LSM5-207ENST00000410044 FKBP3Q00688 224 aaKnown RBP16.62■□□□□ 0.25
LSM5-207ENST00000410044 NOLC1Q14978 699 aaKnown RBP eCLIP16.62■□□□□ 0.25
LSM5-207ENST00000410044 TMEM132AQ24JP5 1023 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 ZNF568Q3ZCX4 644 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 TMEM240Q5SV17 173 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 KLHL10Q6JEL2 608 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 ARMCX5Q6P1M9 558 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 C11orf57Q6ZUT1 292 aaPredicted RBP16.62■□□□□ 0.25
LSM5-207ENST00000410044 ZNF598Q86UK7 904 aaKnown RBP16.62■□□□□ 0.25
LSM5-207ENST00000410044 CDR2LQ86X02 465 aaPredicted RBP16.62■□□□□ 0.25
LSM5-207ENST00000410044 SMG8Q8ND04 991 aaKnown RBP16.62■□□□□ 0.25
LSM5-207ENST00000410044 ENOX1Q8TC92 643 aaKnown RBP16.62■□□□□ 0.25
LSM5-207ENST00000410044 POMGNT1Q8WZA1 660 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 TSG101Q99816 390 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 CBWD1Q9BRT8 395 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 EIF2AQ9BY44 585 aaKnown RBP16.62■□□□□ 0.25
LSM5-207ENST00000410044 KIAA1586Q9HCI6 787 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 RNF216Q9NWF9 866 aaPredicted RBP16.62■□□□□ 0.25
LSM5-207ENST00000410044 AGO2Q9UKV8 859 aaKnown RBP16.62■□□□□ 0.25
LSM5-207ENST00000410044 PCDHB2Q9Y5E7 798 aa16.62■□□□□ 0.25
LSM5-207ENST00000410044 TRIM49BA6NDI0 452 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 MAPK13O15264 365 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 NPTXRO95502 500 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 NR3C1P04150 777 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 ADRB2P07550 413 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 GRM5P41594 1212 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 HSP90AA2PQ14568 343 aaPredicted RBP16.61■□□□□ 0.25
LSM5-207ENST00000410044 ANO6Q4KMQ2 910 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 PSRC1Q6PGN9 363 aaPredicted RBP16.61■□□□□ 0.25
LSM5-207ENST00000410044 CRELD2Q6UXH1 353 aaPredicted RBP16.61■□□□□ 0.25
LSM5-207ENST00000410044 ZNF365Q70YC5 407 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 ZBTB33Q86T24 672 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 ECHDC2Q86YB7 292 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 HERVK_113Q902F9 699 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 MSTO1Q9BUK6 570 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 NAT10Q9H0A0 1025 aaKnown RBP16.61■□□□□ 0.25
LSM5-207ENST00000410044 GZF1Q9H116 711 aaPredicted RBP16.61■□□□□ 0.25
LSM5-207ENST00000410044 DNAJC25Q9H1X3 360 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 HSPBP1Q9NZL4 362 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 CTNND2Q9UQB3 1225 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 IPPQ9Y573 584 aa16.61■□□□□ 0.25
LSM5-207ENST00000410044 RBAK-RBAKDNI3L0D1 243 aa16.6■□□□□ 0.25
LSM5-207ENST00000410044 EXTL3O43909 919 aa16.6■□□□□ 0.25
LSM5-207ENST00000410044 CLTAP09496 248 aa16.6■□□□□ 0.25
LSM5-207ENST00000410044 ATF7P17544 494 aaPredicted RBP16.6■□□□□ 0.25
LSM5-207ENST00000410044 ADAM9Q13443 819 aa16.6■□□□□ 0.25
LSM5-207ENST00000410044 FILIP1Q7Z7B0 1213 aa16.6■□□□□ 0.25
LSM5-207ENST00000410044 GPD1LQ8N335 351 aa16.6■□□□□ 0.25
LSM5-207ENST00000410044 XXYLT1Q8NBI6 393 aa16.6■□□□□ 0.25
LSM5-207ENST00000410044 CEP63Q96MT8 703 aa16.6■□□□□ 0.25
LSM5-207ENST00000410044 GDF15Q99988 308 aa16.6■□□□□ 0.25
LSM5-207ENST00000410044 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.6■□□□□ 0.25
LSM5-207ENST00000410044 MKNK1Q9BUB5 465 aa16.6■□□□□ 0.25
LSM5-207ENST00000410044 PCIF1Q9H4Z3 704 aa16.6■□□□□ 0.25
LSM5-207ENST00000410044 ANKFY1Q9P2R3 1169 aa16.6■□□□□ 0.25
LSM5-207ENST00000410044 CPSF3Q9UKF6 684 aaKnown RBP16.6■□□□□ 0.25
LSM5-207ENST00000410044 CETN3O15182 167 aa16.59■□□□□ 0.25
LSM5-207ENST00000410044 STAG3L1P0CL83 205 aa16.59■□□□□ 0.25
LSM5-207ENST00000410044 NR2F2P24468 414 aa16.59■□□□□ 0.25
LSM5-207ENST00000410044 MATR3P43243 847 aaKnown RBP eCLIP16.59■□□□□ 0.25
LSM5-207ENST00000410044 MAGEA10P43363 369 aaPredicted RBP16.59■□□□□ 0.25
LSM5-207ENST00000410044 STX17P56962 302 aa16.59■□□□□ 0.25
LSM5-207ENST00000410044 XKR4Q5GH76 650 aa16.59■□□□□ 0.25
LSM5-207ENST00000410044 RASIP1Q5U651 963 aa16.59■□□□□ 0.25
LSM5-207ENST00000410044 SPATA1Q5VX52 437 aa16.59■□□□□ 0.25
LSM5-207ENST00000410044 LRRC55Q6ZSA7 311 aa16.59■□□□□ 0.25
LSM5-207ENST00000410044 HACE1Q8IYU2 909 aa16.59■□□□□ 0.25
LSM5-207ENST00000410044 PGBD4Q96DM1 585 aa16.59■□□□□ 0.25
LSM5-207ENST00000410044 TRIM6Q9C030 488 aaPredicted RBP16.59■□□□□ 0.25
LSM5-207ENST00000410044 UBN1Q9NPG3 1134 aa16.59■□□□□ 0.25
LSM5-207ENST00000410044 TMEM161AQ9NX61 479 aa16.59■□□□□ 0.25
LSM5-207ENST00000410044 CITO14578 2027 aa16.58■□□□□ 0.25
LSM5-207ENST00000410044 IKBKBO14920 756 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 INPPL1O15357 1258 aa16.58■□□□□ 0.24
LSM5-207ENST00000410044 FGFR1OPO95684 399 aaKnown RBP16.58■□□□□ 0.24
LSM5-207ENST00000410044 BMP8BP34820 402 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms