RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 STK33Q9BYT3 514 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 SLC38A7Q9NVC3 462 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 NFU1Q9UMS0 254 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 MYMKA6NI61 221 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 TOM1L1O75674 476 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 TTC4O95801 387 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 NNTQ13423 1086 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 ZKSCAN8Q15776 578 aaPredicted RBP9.66□□□□□ -0.86
PBRM1-208ENST00000410007 ATG16L1Q676U5 607 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 TADA2BQ86TJ2 420 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 KSR1Q8IVT5 923 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 APPL2Q8NEU8 664 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 SPDYE1Q8NFV5 336 aaPredicted RBP9.66□□□□□ -0.86
PBRM1-208ENST00000410007 POLR3CQ9BUI4 534 aaPredicted RBP9.66□□□□□ -0.86
PBRM1-208ENST00000410007 APEX2Q9UBZ4 518 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 MAD2L2Q9UI95 211 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 FARP1Q9Y4F1 1045 aaPredicted RBP9.66□□□□□ -0.86
PBRM1-208ENST00000410007 IGSF9BQ9UPX0 1349 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 ITSN1Q15811 1721 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 HMGB1P1B2RPK0 211 aaPredicted RBP9.66□□□□□ -0.86
PBRM1-208ENST00000410007 CLGNO14967 610 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 RTN2O75298 545 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 RPS6KA5O75582 802 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 ACSL3O95573 720 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 HSPA8P11142 646 aaKnown RBP9.66□□□□□ -0.86
PBRM1-208ENST00000410007 TAC1P20366 129 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 RAD51Q06609 339 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 SNRNP35Q16560 246 aaKnown RBP9.66□□□□□ -0.86
PBRM1-208ENST00000410007 CEP120Q8N960 986 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 LRGUKQ96M69 825 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 SH2D3AQ9BRG2 576 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 MKNK1Q9BUB5 465 aa9.66□□□□□ -0.86
PBRM1-208ENST00000410007 PRDM5Q9NQX1 630 aaPredicted RBP9.66□□□□□ -0.86
PBRM1-208ENST00000410007 NOVA2Q9UNW9 492 aaKnown RBP9.66□□□□□ -0.86
PBRM1-208ENST00000410007 FMO5P49326 533 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 ACOT2P49753 483 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 CPT1AP50416 773 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 LMBRD2Q68DH5 695 aaPredicted RBP9.65□□□□□ -0.86
PBRM1-208ENST00000410007 C18orf8Q96DM3 657 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 KAZALD1Q96I82 304 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 DDX50Q9BQ39 737 aaKnown RBP9.65□□□□□ -0.86
PBRM1-208ENST00000410007 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.65□□□□□ -0.862e-6■■□□□ 12.7
PBRM1-208ENST00000410007 DHX35Q9H5Z1 703 aaKnown RBP9.65□□□□□ -0.86
PBRM1-208ENST00000410007 C17orf75Q9HAS0 396 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 SENP2Q9HC62 589 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 SNX9Q9Y5X1 595 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 CAPN7Q9Y6W3 813 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 CTSHP09668 335 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 FDPSP14324 419 aaKnown RBP9.65□□□□□ -0.86
PBRM1-208ENST00000410007 SERPINB6P35237 376 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 SLC1A1P43005 524 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 GCLCP48506 637 aaPredicted RBP9.65□□□□□ -0.86
PBRM1-208ENST00000410007 CCT5P48643 541 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 NR1H3Q13133 447 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 NCOA4Q13772 614 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 CASP8Q14790 479 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 C9orf131Q5VYM1 1079 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 SPATA2LQ8IUW3 424 aaPredicted RBP9.65□□□□□ -0.86
PBRM1-208ENST00000410007 TUBB6Q9BUF5 446 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 TRPV6Q9H1D0 765 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 CYP26A1O43174 497 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 BACE1P56817 501 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 MOXD1Q6UVY6 613 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 CHMP6Q96FZ7 201 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 TAAR1Q96RJ0 339 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 OSBPL9Q96SU4 736 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 BFARQ9NZS9 450 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 FAN1Q9Y2M0 1017 aa9.65□□□□□ -0.86
PBRM1-208ENST00000410007 TADA2AO75478 443 aa9.65□□□□□ -0.87
PBRM1-208ENST00000410007 FCGRTP55899 365 aa9.65□□□□□ -0.87
PBRM1-208ENST00000410007 NFIAQ12857 509 aa9.65□□□□□ -0.87
PBRM1-208ENST00000410007 STK4Q13043 487 aa9.65□□□□□ -0.87
PBRM1-208ENST00000410007 NME3Q13232 169 aa9.65□□□□□ -0.87
PBRM1-208ENST00000410007 KLHL38Q2WGJ6 581 aa9.65□□□□□ -0.87
PBRM1-208ENST00000410007 GNASQ5JWF2 1037 aa9.65□□□□□ -0.87
PBRM1-208ENST00000410007 GLB1LQ6UWU2 654 aa9.65□□□□□ -0.87
PBRM1-208ENST00000410007 Q9H521 79 aa9.65□□□□□ -0.87
PBRM1-208ENST00000410007 SP110Q9HB58 689 aa9.65□□□□□ -0.87
PBRM1-208ENST00000410007 FAM187AA6NFU0 413 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 MOCS2O96007 188 aaPredicted RBP9.64□□□□□ -0.87
PBRM1-208ENST00000410007 IL1R1P14778 569 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 NR1D1P20393 614 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 RCN2Q14257 317 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 KRT33BQ14525 404 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 ATF7IP2Q5U623 682 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 PLA2G4FQ68DD2 849 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 HPS3Q969F9 1004 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 ZKSCAN4Q969J2 545 aaPredicted RBP9.64□□□□□ -0.87
PBRM1-208ENST00000410007 EPAS1Q99814 870 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 RTFDC1Q9BY42 306 aaPredicted RBP9.64□□□□□ -0.87
PBRM1-208ENST00000410007 TMEM60Q9H2L4 133 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 MROH8Q9H579 483 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 ABCB6Q9NP58 842 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 DNAJC17Q9NVM6 304 aaKnown RBP9.64□□□□□ -0.87
PBRM1-208ENST00000410007 EHD2Q9NZN4 543 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 TUBE1Q9UJT0 475 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 A0A1B0GTH6 734 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 SSU72P8A0A1W2PR75 194 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 NEMP1O14524 444 aa9.64□□□□□ -0.87
PBRM1-208ENST00000410007 BAG2O95816 211 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms