RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 DOCK5Q9H7D0 1870 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 AHCTF1Q8WYP5 2266 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 ABCB11O95342 1321 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 EML5Q05BV3 1969 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 MGAQ8IWI9 3026 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 POLQO75417 2590 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 TRABD2BA6NFA1 517 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 RRN3P2A6NIE6 340 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 NMT2O60551 498 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 GNAI3P08754 354 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 INSRRP14616 1297 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 GBP1P32455 592 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 TCF7P36402 384 aaPredicted RBP8.06□□□□□ -1.12
UBE2F-204ENST00000409953 IL12RB1P42701 662 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 SLC11A1P49279 550 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 HNRNPDQ14103 355 aaKnown RBP8.06□□□□□ -1.12
UBE2F-204ENST00000409953 LY6DQ14210 128 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 PGM5Q15124 567 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 WDR44Q5JSH3 913 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 VSIG10LQ86VR7 867 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 HDDC3Q8N4P3 179 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 ING5Q8WYH8 240 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 NRDE2Q9H7Z3 1164 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 PCDHA2Q9Y5H9 948 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 PCDHA1Q9Y5I3 950 aa8.06□□□□□ -1.12
UBE2F-204ENST00000409953 USP9YO00507 2555 aaPredicted RBP8.05□□□□□ -1.12
UBE2F-204ENST00000409953 SMIM35A0A1B0GVV1 85 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 GSG1L2A8MUP6 293 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 TGM5O43548 720 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 GAS2O43903 313 aaKnown RBP8.05□□□□□ -1.12
UBE2F-204ENST00000409953 ENGP17813 658 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 PTMSP20962 102 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 TRIP6Q15654 476 aaKnown RBP8.05□□□□□ -1.12
UBE2F-204ENST00000409953 TRIM61Q5EBN2 209 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 DGKKQ5KSL6 1271 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 TANGO2Q6ICL3 276 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 PDXDC1Q6P996 788 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 ZNF574Q6ZN55 896 aaPredicted RBP8.05□□□□□ -1.12
UBE2F-204ENST00000409953 NME8Q8N427 588 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 TRAPPC12Q8WVT3 735 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 IRF7Q92985 503 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 PPP1R16BQ96T49 567 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 GBP3Q9H0R5 595 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 ZNF334Q9HCZ1 680 aaPredicted RBP8.05□□□□□ -1.12
UBE2F-204ENST00000409953 DNAJB4Q9UDY4 337 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 EVLQ9UI08 416 aaPredicted RBP8.05□□□□□ -1.12
UBE2F-204ENST00000409953 ATG2BQ96BY7 2078 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 FLNCQ14315 2725 aa8.05□□□□□ -1.12
UBE2F-204ENST00000409953 KIF26AQ9ULI4 1882 aaPredicted RBP8.04□□□□□ -1.12
UBE2F-204ENST00000409953 MYH7P12883 1935 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 MAFGO15525 162 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 SURF6O75683 361 aaKnown RBP8.04□□□□□ -1.12
UBE2F-204ENST00000409953 SOD2P04179 222 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 ZSCAN20P17040 1043 aaPredicted RBP8.04□□□□□ -1.12
UBE2F-204ENST00000409953 CCND2P30279 289 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 ADSSP30520 456 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 EIF2S3P41091 472 aaKnown RBP8.04□□□□□ -1.12
UBE2F-204ENST00000409953 TDO2P48775 406 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 RNASELQ05823 741 aaKnown RBP8.04□□□□□ -1.12
UBE2F-204ENST00000409953 SEMA3FQ13275 785 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 KARSQ15046 597 aaKnown RBP8.04□□□□□ -1.12
UBE2F-204ENST00000409953 PLCB4Q15147 1175 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 KRTAP21-3Q3LHN1 58 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 GNPTABQ3T906 1256 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 GIMAP6Q6P9H5 292 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 ZNF598Q86UK7 904 aaKnown RBP8.04□□□□□ -1.12
UBE2F-204ENST00000409953 MARCH9Q86YJ5 346 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 GLYCTKQ8IVS8 523 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 ELSPBP1Q96BH3 223 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 MCRS1Q96EZ8 462 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 WBP1Q96G27 269 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 CAMK1GQ96NX5 476 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 OSMRQ99650 979 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 HERC2P3Q9BVR0 1158 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 TRMT61BQ9BVS5 477 aaKnown RBP8.04□□□□□ -1.12
UBE2F-204ENST00000409953 NUSAP1Q9BXS6 441 aaKnown RBP8.04□□□□□ -1.12
UBE2F-204ENST00000409953 PUS7LQ9H0K6 701 aaKnown RBP8.04□□□□□ -1.12
UBE2F-204ENST00000409953 POLMQ9NP87 494 aaPredicted RBP8.04□□□□□ -1.12
UBE2F-204ENST00000409953 IL17RBQ9NRM6 502 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 TBC1D13Q9NVG8 400 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 MBD1Q9UIS9 605 aaPredicted RBP8.04□□□□□ -1.12
UBE2F-204ENST00000409953 POLIQ9UNA4 740 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 SLC8A2Q9UPR5 921 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 APOBEC2Q9Y235 224 aaKnown RBP8.04□□□□□ -1.12
UBE2F-204ENST00000409953 SSX2IPQ9Y2D8 614 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 PTPRBP23467 1997 aa8.04□□□□□ -1.12
UBE2F-204ENST00000409953 SETD2Q9BYW2 2564 aaPredicted RBP8.03□□□□□ -1.12
UBE2F-204ENST00000409953 TSPY2A6NKD2 308 aa8.03□□□□□ -1.12
UBE2F-204ENST00000409953 DDX11L8A8MPP1 907 aa8.03□□□□□ -1.12
UBE2F-204ENST00000409953 B4GALT3O60512 393 aa8.03□□□□□ -1.12
UBE2F-204ENST00000409953 KRT10P13645 584 aa8.03□□□□□ -1.12
UBE2F-204ENST00000409953 GDI1P31150 447 aa8.03□□□□□ -1.12
UBE2F-204ENST00000409953 ZNF76P36508 570 aa8.03□□□□□ -1.12
UBE2F-204ENST00000409953 GLUD2P49448 558 aa8.03□□□□□ -1.12
UBE2F-204ENST00000409953 CXADRP78310 365 aa8.03□□□□□ -1.12
UBE2F-204ENST00000409953 UBAP2LQ14157 1087 aaKnown RBP8.03□□□□□ -1.12
UBE2F-204ENST00000409953 UBE3CQ15386 1083 aa8.03□□□□□ -1.12
UBE2F-204ENST00000409953 CDC37Q16543 378 aaPredicted RBP8.03□□□□□ -1.12
UBE2F-204ENST00000409953 PMS2CLQ68D20 193 aa8.03□□□□□ -1.12
UBE2F-204ENST00000409953 PKN3Q6P5Z2 889 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms