RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 TUBB4AP04350 444 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 GJB1P08034 283 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 CCDC175P0C221 793 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 SMIM10L2AP0DMW4 78 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 SMIM10L2BP0DMW5 78 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 ACTN1P12814 892 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 POLR2FP61218 127 aaKnown RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 MCL1Q07820 350 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 GRM1Q13255 1194 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 MFSD10Q14728 455 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 MAPK6Q16659 721 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 AMHR2Q16671 573 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 TSR1Q2NL82 804 aaKnown RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 ASTE1Q2TB18 679 aaPredicted RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 NBPF20Q3BBV1 942 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 C15orf39Q6ZRI6 1047 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 RRAGAQ7L523 313 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 CACNA2D4Q7Z3S7 1137 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 RDH13Q8NBN7 331 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 LMBR1Q8WVP7 490 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 TMEM117Q9H0C3 514 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 INTS2Q9H0H0 1204 aaKnown RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 AP5M1Q9H0R1 490 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 ZNHIT6Q9NWK9 470 aaKnown RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 RNF186Q9NXI6 227 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 ARHGAP20Q9P2F6 1191 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 AJAP1Q9UKB5 411 aaPredicted RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 REXO2Q9Y3B8 237 aaKnown RBP6□□□□□ -1.45
EPHA4-202ENST00000409854 FHOD1Q9Y613 1164 aa6□□□□□ -1.45
EPHA4-202ENST00000409854 SSU72P8A0A1W2PR75 194 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 ZNF233A6NK53 670 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 EIF3CLB5ME19 914 aaKnown RBP5.99□□□□□ -1.45
EPHA4-202ENST00000409854 KIF2AO00139 706 aaPredicted RBP5.99□□□□□ -1.45
EPHA4-202ENST00000409854 KPNA6O60684 536 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 TBC1D8O95759 1140 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 TMOD1P28289 359 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 PHKA2P46019 1235 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 PSEN2P49810 448 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 IGBP1P78318 339 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 PURAQ00577 322 aaKnown RBP5.99□□□□□ -1.45
EPHA4-202ENST00000409854 DMTNQ08495 405 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 KIAA0753Q2KHM9 967 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 USP37Q86T82 979 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 ZNF410Q86VK4 478 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 KIAA0319LQ8IZA0 1049 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 EHBP1Q8NDI1 1231 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 ZBTB45Q96K62 511 aaPredicted RBP5.99□□□□□ -1.45
EPHA4-202ENST00000409854 PRIMPOLQ96LW4 560 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 EIF3CQ99613 913 aaKnown RBP5.99□□□□□ -1.45
EPHA4-202ENST00000409854 DESI2Q9BSY9 194 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 KATNAL1Q9BW62 490 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 MINDY3Q9H8M7 445 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 NHEJ1Q9H9Q4 299 aaPredicted RBP5.99□□□□□ -1.45
EPHA4-202ENST00000409854 TMEM8AQ9HCN3 771 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 PRMT7Q9NVM4 692 aaPredicted RBP5.99□□□□□ -1.45
EPHA4-202ENST00000409854 TRMT1Q9NXH9 659 aaKnown RBP5.99□□□□□ -1.45
EPHA4-202ENST00000409854 APEX2Q9UBZ4 518 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 TNFSF13BQ9Y275 285 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 EPN1Q9Y6I3 576 aaPredicted RBP5.99□□□□□ -1.45
EPHA4-202ENST00000409854 CNTNAP2Q9UHC6 1331 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 SMIM35A0A1B0GVV1 85 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 RBAK-RBAKDNI3L0D1 243 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 SEPT4O43236 478 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 IQCF3P0C7M6 154 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 SRGAP2CP0DJJ0 459 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 PRKCIP41743 596 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 MXI1P50539 228 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 GPC3P51654 580 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 NLRP11P59045 1033 aaKnown RBP5.99□□□□□ -1.45
EPHA4-202ENST00000409854 IRX5P78411 483 aaPredicted RBP5.99□□□□□ -1.45
EPHA4-202ENST00000409854 HIC1Q14526 733 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 KIF22Q14807 665 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 FSCN1Q16658 493 aaKnown RBP5.99□□□□□ -1.45
EPHA4-202ENST00000409854 SFMBT2Q5VUG0 894 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 IQCEQ6IPM2 695 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 MPZL3Q6UWV2 235 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 METTL13Q8N6R0 699 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 C16orf45Q96MC5 204 aaPredicted RBP5.99□□□□□ -1.45
EPHA4-202ENST00000409854 FAM213AQ9BRX8 229 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 MSTO1Q9BUK6 570 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 GPR88Q9GZN0 384 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 NLRC4Q9NPP4 1024 aa5.99□□□□□ -1.45
EPHA4-202ENST00000409854 ATP8B3O60423 1300 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 ADAMTS4O75173 837 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 GNRH1P01148 92 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 SERPING1P05155 500 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 CYLC1P35663 651 aaPredicted RBP5.98□□□□□ -1.45
EPHA4-202ENST00000409854 VEGFBP49765 207 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 WNT7BP56706 349 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 POU5F1Q01860 360 aaKnown RBP5.98□□□□□ -1.45
EPHA4-202ENST00000409854 CACNB2Q08289 660 aaPredicted RBP5.98□□□□□ -1.45
EPHA4-202ENST00000409854 PTPN14Q15678 1187 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 MAP3K21Q5TCX8 1036 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 KRT39Q6A163 491 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 NFRKBQ6P4R8 1299 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 IRF2BP2Q7Z5L9 587 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 BRSK2Q8IWQ3 736 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 ACRBPQ8NEB7 543 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 VTI1AQ96AJ9 217 aa5.98□□□□□ -1.45
EPHA4-202ENST00000409854 NLRP4Q96MN2 994 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms