RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 CDT1Q9H211 546 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 PTPRHQ9HD43 1115 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 RNF19AQ9NV58 838 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 TMEM39AQ9NV64 488 aa13.73□□□□□ -0.21
PMS1-204ENST00000409823 A0A1B0GUA9 196 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 ABLIM1O14639 778 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 TLR3O15455 904 aaKnown RBP13.72□□□□□ -0.21
PMS1-204ENST00000409823 ADRB2P07550 413 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 PSMC2P35998 433 aaKnown RBP13.72□□□□□ -0.21
PMS1-204ENST00000409823 DLG4P78352 724 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 NCBP1Q09161 790 aaKnown RBP13.72□□□□□ -0.21
PMS1-204ENST00000409823 NOLC1Q14978 699 aaKnown RBP eCLIP13.72□□□□□ -0.21
PMS1-204ENST00000409823 FILIP1Q7Z7B0 1213 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 CCDC155Q8N6L0 562 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 TUBGCP2Q9BSJ2 902 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 AGPAT5Q9NUQ2 364 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 TNFSF13BQ9Y275 285 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 NPTXRO95502 500 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 FGFR1OPO95684 399 aaKnown RBP13.72□□□□□ -0.21
PMS1-204ENST00000409823 TRIM49P0CI25 452 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 TRIM49CP0CI26 452 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 EPB41P11171 864 aaKnown RBP13.72□□□□□ -0.21
PMS1-204ENST00000409823 WNT7BP56706 349 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 UBASH3AP57075 661 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 PAK2Q13177 524 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 TWF2Q6IBS0 349 aaKnown RBP13.72□□□□□ -0.21
PMS1-204ENST00000409823 APTXQ7Z2E3 356 aaKnown RBP13.72□□□□□ -0.21
PMS1-204ENST00000409823 ZC3H3Q8IXZ2 948 aaKnown RBP13.72□□□□□ -0.21
PMS1-204ENST00000409823 KCNN1Q92952 543 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 CEP63Q96MT8 703 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 APOL6Q9BWW8 343 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 XPO4Q9C0E2 1151 aaKnown RBP13.72□□□□□ -0.21
PMS1-204ENST00000409823 ARMCX3Q9UH62 379 aaPredicted RBP13.72□□□□□ -0.21
PMS1-204ENST00000409823 STYXL1Q9Y6J8 313 aa13.72□□□□□ -0.21
PMS1-204ENST00000409823 SELPP16109 830 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 GARTP22102 1010 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 SCP2P22307 547 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 PROZP22891 400 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 MCL1Q07820 350 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 LMBRD2Q68DH5 695 aaPredicted RBP13.71□□□□□ -0.21
PMS1-204ENST00000409823 SLFN12LQ6IEE8 588 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 NOTUMQ6P988 496 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 CRELD2Q6UXH1 353 aaPredicted RBP13.71□□□□□ -0.21
PMS1-204ENST00000409823 SLC9A9Q8IVB4 645 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 GPD1LQ8N335 351 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 CAGE1Q8TC20 777 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 NOC4LQ9BVI4 516 aaKnown RBP13.71□□□□□ -0.21
PMS1-204ENST00000409823 ADCY5O95622 1261 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 DLATP10515 647 aaKnown RBP13.71□□□□□ -0.21
PMS1-204ENST00000409823 ITGB8P26012 769 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 SPAG1Q07617 926 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 BFSP2Q13515 415 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 UVSSAQ2YD98 709 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 DEFB128Q7Z7B8 93 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 IFIH1Q9BYX4 1025 aaKnown RBP13.71□□□□□ -0.21
PMS1-204ENST00000409823 TRIM6Q9C030 488 aaPredicted RBP13.71□□□□□ -0.21
PMS1-204ENST00000409823 WNT8AQ9H1J5 351 aa13.71□□□□□ -0.21
PMS1-204ENST00000409823 CCDC85CA6NKD9 419 aa13.71□□□□□ -0.22
PMS1-204ENST00000409823 N4BP3O15049 544 aa13.71□□□□□ -0.22
PMS1-204ENST00000409823 TEX33O43247 280 aa13.71□□□□□ -0.22
PMS1-204ENST00000409823 FAM189A1O60320 539 aa13.71□□□□□ -0.22
PMS1-204ENST00000409823 NBNO60934 754 aa13.71□□□□□ -0.22
PMS1-204ENST00000409823 CLTBP09497 229 aa13.71□□□□□ -0.22
PMS1-204ENST00000409823 EEF1GP26641 437 aaKnown RBP13.71□□□□□ -0.22
PMS1-204ENST00000409823 GPNMBQ14956 572 aa13.71□□□□□ -0.22
PMS1-204ENST00000409823 FAM114A1Q8IWE2 563 aa13.71□□□□□ -0.22
PMS1-204ENST00000409823 C12orf56Q8IXR9 622 aa13.71□□□□□ -0.22
PMS1-204ENST00000409823 PLEKHO2Q8TD55 490 aa13.71□□□□□ -0.22
PMS1-204ENST00000409823 TOX2Q96NM4 488 aa13.71□□□□□ -0.22
PMS1-204ENST00000409823 NXF3Q9H4D5 531 aaKnown RBP13.71□□□□□ -0.22
PMS1-204ENST00000409823 CGNQ9P2M7 1197 aaKnown RBP13.71□□□□□ -0.22
PMS1-204ENST00000409823 CEP290O15078 2479 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 GPR182O15218 404 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 EXTL3O43909 919 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 MGEA5O60502 916 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 AKAP5P24588 427 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 COPB1P53618 953 aaKnown RBP13.7□□□□□ -0.22
PMS1-204ENST00000409823 NFIL3Q16649 462 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 C1orf53Q5VUE5 145 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 SLC27A1Q6PCB7 646 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 FOXR2Q6PJQ5 311 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 ANKRD20A12PQ8NF67 263 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 ADPGKQ9BRR6 497 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 SEZ6LQ9BYH1 1024 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 CXCL16Q9H2A7 254 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 TMX1Q9H3N1 280 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 PDE11AQ9HCR9 933 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 TOPORSQ9NS56 1045 aaPredicted RBP13.7□□□□□ -0.22
PMS1-204ENST00000409823 INTS13Q9NVM9 706 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 RBAKQ9NYW8 714 aaPredicted RBP13.7□□□□□ -0.22
PMS1-204ENST00000409823 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.7□□□□□ -0.22
PMS1-204ENST00000409823 RPLP2P05387 115 aaKnown RBP13.7□□□□□ -0.22
PMS1-204ENST00000409823 CXCL8P10145 99 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 SNRPFP62306 86 aaKnown RBP13.7□□□□□ -0.22
PMS1-204ENST00000409823 FAM26DQ5JW98 314 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 MIIPQ5JXC2 388 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 UBE2Q1Q7Z7E8 422 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 TMEM130Q8N3G9 435 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 BORCS6Q96GS4 357 aa13.7□□□□□ -0.22
PMS1-204ENST00000409823 ABHD8Q96I13 439 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms