RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SMARCA1P28370 1054 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 FCGRTP55899 365 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 FAM47EQ6ZV65 393 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 ZKSCAN4Q969J2 545 aaPredicted RBP8.9□□□□□ -0.98
SCN9A-203ENST00000409672 TMEM39BQ9GZU3 492 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 BRD8Q9H0E9 1235 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 ADAMTS1Q9UHI8 967 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 CPA4Q9UI42 421 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 A8MX80 341 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 C5orf58C9J3I9 102 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 PSMD14O00487 310 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 YWHABP31946 246 aaKnown RBP8.9□□□□□ -0.98
SCN9A-203ENST00000409672 ALDH18A1P54886 795 aaKnown RBP8.9□□□□□ -0.98
SCN9A-203ENST00000409672 SKOR1P84550 965 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 DPYDQ12882 1025 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 CARNMT1Q8N4J0 409 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 IPCEF1Q8WWN9 437 aaPredicted RBP8.9□□□□□ -0.98
SCN9A-203ENST00000409672 PHF21AQ96BD5 680 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 AHCYL2Q96HN2 611 aaKnown RBP8.9□□□□□ -0.98
SCN9A-203ENST00000409672 PLEKHA5Q9HAU0 1116 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 NEUROD4Q9HD90 331 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 NDOR1Q9UHB4 597 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 NOVA2Q9UNW9 492 aaKnown RBP8.9□□□□□ -0.98
SCN9A-203ENST00000409672 IQANK1A0A1B0GTG1 560 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 LZTS3O60299 673 aaPredicted RBP8.9□□□□□ -0.98
SCN9A-203ENST00000409672 SERPING1P05155 500 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 SDC4P31431 198 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 WHAMMP3Q1A5X7 153 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 DPCR1Q3MIW9 517 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 HAUS6Q7Z4H7 955 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 OOSP2Q86WS3 158 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 JPH1Q9HDC5 661 aaPredicted RBP8.9□□□□□ -0.98
SCN9A-203ENST00000409672 CYP7B1O75881 506 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 GCKP35557 465 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 CDH6P55285 790 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 DEUP1Q05D60 604 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 UBE3CQ15386 1083 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 GAS2L3Q86XJ1 694 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 ELMO2Q96JJ3 720 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 MAGEB5Q9BZ81 275 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 SPASTQ9UBP0 616 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 AURKCQ9UQB9 309 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 PLA2G4FQ68DD2 849 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 SLC7A14Q8TBB6 771 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 CPA5Q8WXQ8 436 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 FAM161BQ96MY7 647 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 UPF3AQ9H1J1 476 aaKnown RBP8.9□□□□□ -0.98
SCN9A-203ENST00000409672 IL1RL2Q9HB29 575 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 SLC9A2Q9UBY0 812 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 TRIM10Q9UDY6 481 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 ABCC12Q96J65 1359 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 RASGRF2O14827 1237 aa8.9□□□□□ -0.99
SCN9A-203ENST00000409672 ZBTB5O15062 677 aa8.9□□□□□ -0.99
SCN9A-203ENST00000409672 TRAPPC3O43617 180 aa8.9□□□□□ -0.99
SCN9A-203ENST00000409672 ATP1A1P05023 1023 aaKnown RBP8.9□□□□□ -0.99
SCN9A-203ENST00000409672 MYL4P12829 197 aa8.9□□□□□ -0.99
SCN9A-203ENST00000409672 CDC16Q13042 620 aa8.9□□□□□ -0.99
SCN9A-203ENST00000409672 SEZ6Q53EL9 994 aa8.9□□□□□ -0.99
SCN9A-203ENST00000409672 DCAF4Q8WV16 495 aa8.9□□□□□ -0.99
SCN9A-203ENST00000409672 FAM118BQ9BPY3 351 aa8.9□□□□□ -0.99
SCN9A-203ENST00000409672 CIPCQ9C0C6 399 aa8.9□□□□□ -0.99
SCN9A-203ENST00000409672 FOXP1Q9H334 677 aaPredicted RBP8.9□□□□□ -0.99
SCN9A-203ENST00000409672 TMEM63CQ9P1W3 806 aa8.9□□□□□ -0.99
SCN9A-203ENST00000409672 EFCAB12Q6NXP0 572 aa8.9□□□□□ -0.99
SCN9A-203ENST00000409672 DGKHQ86XP1 1220 aa8.9□□□□□ -0.99
SCN9A-203ENST00000409672 NUDT12Q9BQG2 462 aa8.9□□□□□ -0.99
SCN9A-203ENST00000409672 AGO2Q9UKV8 859 aaKnown RBP8.9□□□□□ -0.99
SCN9A-203ENST00000409672 ARHGAP26Q9UNA1 814 aa8.9□□□□□ -0.99
SCN9A-203ENST00000409672 NBPF26B4DH59 902 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 TUBBP07437 444 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 ESRRGP62508 458 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 MORF4L2Q15014 288 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 HPS3Q969F9 1004 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 CPB2Q96IY4 423 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 PARK7Q99497 189 aaKnown RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 EIF2AK1Q9BQI3 630 aaKnown RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 TSEN34Q9BSV6 310 aaKnown RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 ASPSCR1Q9BZE9 553 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 NEDD4P46934 1319 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 SUPT3HO75486 399 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 TUBB4AP04350 444 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 GMPSP49915 693 aaPredicted RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 STAT5BP51692 787 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 CDK17Q00537 523 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 C9orf131Q5VYM1 1079 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 TMC4Q7Z404 712 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 PHACTR4Q8IZ21 702 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 DONSONQ9NYP3 566 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 USE1Q9NZ43 259 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 PCDHGA4Q9Y5G9 962 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 COL15A1P39059 1388 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 ZRANB2O95218 330 aaKnown RBP eCLIP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 NPTXRO95502 500 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 GGPS1O95749 300 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 FGGP02679 453 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 PTRHD1Q6GMV3 140 aaKnown RBP8.89□□□□□ -0.99
SCN9A-203ENST00000409672 CD274Q9NZQ7 290 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 FBXO40Q9UH90 709 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 PP2D1A8MPX8 630 aa8.89□□□□□ -0.99
SCN9A-203ENST00000409672 H0Y3Z8 333 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms