RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 CCDC43Q96MW1 224 aaKnown RBP8.66□□□□□ -1.02
LSM5-202ENST00000409292 NAP1L4Q99733 375 aaKnown RBP8.66□□□□□ -1.02
LSM5-202ENST00000409292 USB1Q9BQ65 265 aaKnown RBP8.66□□□□□ -1.02
LSM5-202ENST00000409292 RNF26Q9BY78 433 aaPredicted RBP8.66□□□□□ -1.02
LSM5-202ENST00000409292 RHOBTB2Q9BYZ6 727 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 TRIM6Q9C030 488 aaPredicted RBP8.66□□□□□ -1.02
LSM5-202ENST00000409292 PLEKHA4Q9H4M7 779 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 PRDM9Q9NQV7 894 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 MAN1C1Q9NR34 630 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 SH3GLB2Q9NR46 395 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.66□□□□□ -1.02
LSM5-202ENST00000409292 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.66□□□□□ -1.02
LSM5-202ENST00000409292 CDH22Q9UJ99 828 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 PCDHB2Q9Y5E7 798 aa8.66□□□□□ -1.02
LSM5-202ENST00000409292 ZFP37Q9Y6Q3 630 aaPredicted RBP8.66□□□□□ -1.02
LSM5-202ENST00000409292 CLUHO75153 1309 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 CCDC195A0A1B0GUA6 201 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 CPLX1O14810 134 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 INPPL1O15357 1258 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 ZNF862O60290 1169 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 MAFO75444 373 aaPredicted RBP8.65□□□□□ -1.02
LSM5-202ENST00000409292 CSDE1O75534 798 aaKnown RBP8.65□□□□□ -1.02
LSM5-202ENST00000409292 C1RP00736 705 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 CNPP09543 421 aaKnown RBP8.65□□□□□ -1.02
LSM5-202ENST00000409292 SRFP11831 508 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 XBP1P17861 261 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 CDC27P30260 824 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 ADD1P35611 737 aaKnown RBP8.65□□□□□ -1.02
LSM5-202ENST00000409292 RFC5P40937 340 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 OR1G1P47890 313 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 MMP16P51512 607 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 TFDP1Q14186 410 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 PUM1Q14671 1186 aaKnown RBP eCLIP8.65□□□□□ -1.02
LSM5-202ENST00000409292 TARBP2Q15633 366 aaKnown RBP8.65□□□□□ -1.02
LSM5-202ENST00000409292 TSGA10IPQ3SY00 556 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 CWF19L1Q69YN2 538 aaKnown RBP8.65□□□□□ -1.02
LSM5-202ENST00000409292 GALNT17Q6IS24 598 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 FAM177A1Q8N128 213 aaPredicted RBP8.65□□□□□ -1.02
LSM5-202ENST00000409292 GPR161Q8N6U8 529 aaKnown RBP8.65□□□□□ -1.02
LSM5-202ENST00000409292 SMG7Q92540 1137 aaKnown RBP8.65□□□□□ -1.02
LSM5-202ENST00000409292 RUBCNQ92622 972 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 CCDC51Q96ER9 411 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 TCEANC2Q96MN5 208 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 RPS6KC1Q96S38 1066 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 HERC2P3Q9BVR0 1158 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 SLC26A6Q9BXS9 759 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 UNC45AQ9H3U1 944 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 SMOC2Q9H3U7 446 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 WDR6Q9NNW5 1121 aaKnown RBP8.65□□□□□ -1.02
LSM5-202ENST00000409292 AGPAT5Q9NUQ2 364 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 CA14Q9ULX7 337 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 SIT1Q9Y3P8 196 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 COL4A3BPQ9Y5P4 624 aa8.65□□□□□ -1.02
LSM5-202ENST00000409292 FAM187AA6NFU0 413 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 NRP1O14786 923 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 KINO60870 393 aaKnown RBP8.64□□□□□ -1.03
LSM5-202ENST00000409292 POMCP01189 267 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 SRGAP2CP0DJJ0 459 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 AXLP30530 894 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 QARSP47897 775 aaKnown RBP8.64□□□□□ -1.03
LSM5-202ENST00000409292 SSRP1Q08945 709 aaKnown RBP8.64□□□□□ -1.03
LSM5-202ENST00000409292 Q4G0T1 1027 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 LIN9Q5TKA1 542 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 PPP4R3AQ6IN85 833 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 PHLDB3Q6NSJ2 640 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 KANK3Q6NY19 840 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 MOXD1Q6UVY6 613 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 Q6ZUG5 572 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 TMEM173Q86WV6 379 aaPredicted RBP8.64□□□□□ -1.03
LSM5-202ENST00000409292 TBCKQ8TEA7 893 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 BRF1Q92994 677 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 CEP170P1Q96L14 293 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 BCO2Q9BYV7 579 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 TBC1D17Q9HA65 648 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 ARHGEF3Q9NR81 526 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 ZDHHC7Q9NXF8 308 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 EPS15L1Q9UBC2 864 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 DNAJB4Q9UDY4 337 aa8.64□□□□□ -1.03
LSM5-202ENST00000409292 DDX25Q9UHL0 483 aaKnown RBP8.64□□□□□ -1.03
LSM5-202ENST00000409292 PRG3Q9Y2Y8 225 aaPredicted RBP8.64□□□□□ -1.03
LSM5-202ENST00000409292 IGKV6-21A0A0C4DH24 114 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 NCAM2O15394 837 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 PI15O43692 258 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 CDC45O75419 566 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 ZMYND10O75800 440 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 PSMD10O75832 226 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 BAG4O95429 457 aaKnown RBP8.63□□□□□ -1.03
LSM5-202ENST00000409292 NPR3P17342 541 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 NCLP19338 710 aaKnown RBP8.63□□□□□ -1.03
LSM5-202ENST00000409292 MAGEA9P43362 315 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 PFKPQ01813 784 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 MXD4Q14582 209 aaPredicted RBP8.63□□□□□ -1.03
LSM5-202ENST00000409292 UGCGQ16739 394 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 USP41Q3LFD5 358 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 BMP2KLQ5H9B9 411 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 SPECC1Q5M775 1068 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 NOTUMQ6P988 496 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 PDXDC1Q6P996 788 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 DCLRE1AQ6PJP8 1040 aa8.63□□□□□ -1.03
LSM5-202ENST00000409292 MTSS1LQ765P7 747 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms