RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 PLA2G15Q8NCC3 412 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 SSH1Q8WYL5 1049 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 JADE3Q92613 823 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 ENKD1Q9H0I2 346 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 WNT8AQ9H1J5 351 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 C12orf65Q9H3J6 166 aaKnown RBP6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 DDX21Q9NR30 783 aaKnown RBP eCLIP6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 RCAN3Q9UKA8 241 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 PCDHB6Q9Y5E3 794 aa6.3□□□□□ -1.4
HMGB1P13-201ENST00000406019 ANO9A1A5B4 782 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 TOX4O94842 621 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 PHKG2P15735 406 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 ENPP1P22413 925 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 MSX2P35548 267 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 MTNR1BP49286 362 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 BPIFB4P59827 614 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 FSCN1Q16658 493 aaKnown RBP6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 SPTY2D1Q68D10 685 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 GAREM2Q75VX8 874 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 UNC5BQ8IZJ1 945 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 ZNF808Q8N4W9 903 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 CDYL2Q8N8U2 506 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 SLC35G2Q8TBE7 412 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 IL17RAQ96F46 866 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 HIST1H2AHQ96KK5 128 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 HIST1H2AJQ99878 128 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 NMRK2Q9NPI5 230 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 DDX20Q9UHI6 824 aaKnown RBP6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 TCAF1Q9Y4C2 921 aa6.29□□□□□ -1.4
HMGB1P13-201ENST00000406019 A0A1W2PR48 441 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 MUSKO15146 869 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 CREB3O43889 395 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 LY86O95711 162 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 CLEC2LP0C7M8 214 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 INSRRP14616 1297 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 HSPA6P17066 643 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 ACO1P21399 889 aaKnown RBP6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 AGXTP21549 392 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 KIR2DL3P43628 341 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 GPR15P49685 360 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 CD69Q07108 199 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 MORC3Q14149 939 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 ZXDCQ2QGD7 858 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 CCDC178Q5BJE1 867 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 SPDYAQ5MJ70 313 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 DBX2Q6ZNG2 339 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 CHST15Q7LFX5 561 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 ANKRD53Q8N9V6 530 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 GCDHQ92947 438 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 FERMT2Q96AC1 680 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 TAAR9Q96RI9 348 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 GPR20Q99678 358 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 ANO3Q9BYT9 981 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 DEF6Q9H4E7 631 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 C1orf112Q9NSG2 853 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 EVLQ9UI08 416 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 PRSS50Q9UI38 385 aa6.28□□□□□ -1.4
HMGB1P13-201ENST00000406019 IFRD1O00458 451 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 TMEM127O75204 238 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 ADKP55263 362 aaKnown RBP6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 GRM7Q14831 915 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 CLUL1Q15846 466 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 ARHGAP29Q52LW3 1261 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 IL31Q6EBC2 164 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 KCNK18Q7Z418 384 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 SPRED1Q7Z699 444 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 PALM2Q8IXS6 379 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 FAM43AQ8N2R8 423 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 TGFBRAP1Q8WUH2 860 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 TTC17Q96AE7 1141 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 RPL10LQ96L21 214 aaKnown RBP6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 LRGUKQ96M69 825 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 CDK5RAP1Q96SZ6 601 aaKnown RBP6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 C14orf93Q9H972 538 aaKnown RBP6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 IL23AQ9NPF7 189 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 MAN1C1Q9NR34 630 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 DNAJC28Q9NX36 388 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 USP25Q9UHP3 1055 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 SH3BP1Q9Y3L3 701 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 GPR45Q9Y5Y3 372 aa6.27□□□□□ -1.41
HMGB1P13-201ENST00000406019 FRMPD2Q68DX3 1309 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 ST20-MTHFSA0A0A6YYL1 179 aa6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 FSBPO95073 299 aa6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 JUNP05412 331 aaKnown RBP6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 HTR3AP46098 478 aa6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 USP14P54578 494 aa6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 ACAP2Q15057 778 aa6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 MAN2A1Q16706 1144 aa6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 C4orf46Q504U0 113 aa6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 ATAT1Q5SQI0 421 aa6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 MSL3Q8N5Y2 521 aaKnown RBP6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 GAB3Q8WWW8 586 aa6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 RSAD2Q8WXG1 361 aa6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 ADOQ96SZ5 270 aa6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 ARPC5LQ9BPX5 153 aa6.26□□□□□ -1.41
HMGB1P13-201ENST00000406019 A0A1W2PRX2 142 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 UBE2QL1A1L167 161 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 APAF1O14727 1248 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 MAFGO15525 162 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 AP1G1O43747 822 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms