RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 CYFIP2Q96F07 1278 aa14.16□□□□□ -0.14
SNED1-205ENST00000405547 ZMAT2Q96NC0 199 aaKnown RBP14.16□□□□□ -0.14
SNED1-205ENST00000405547 TIPINQ9BVW5 301 aa14.16□□□□□ -0.14
SNED1-205ENST00000405547 TMEM260Q9NX78 707 aa14.16□□□□□ -0.14
SNED1-205ENST00000405547 EYA4O95677 639 aa14.16□□□□□ -0.14
SNED1-205ENST00000405547 CNGA3Q16281 694 aa14.16□□□□□ -0.14
SNED1-205ENST00000405547 LXNQ9BS40 222 aa14.16□□□□□ -0.14
SNED1-205ENST00000405547 TRABDQ9H4I3 376 aa14.16□□□□□ -0.14
SNED1-205ENST00000405547 TDP2O95551 362 aa14.16□□□□□ -0.14
SNED1-205ENST00000405547 ARHGAP27Q6ZUM4 889 aa14.16□□□□□ -0.14
SNED1-205ENST00000405547 NOA1Q8NC60 698 aaKnown RBP14.16□□□□□ -0.14
SNED1-205ENST00000405547 SLC44A5Q8NCS7 719 aa14.16□□□□□ -0.14
SNED1-205ENST00000405547 TRIM10Q9UDY6 481 aa14.16□□□□□ -0.14
SNED1-205ENST00000405547 SCP2P22307 547 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 SCARF1Q14162 830 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 HP1BP3Q5SSJ5 553 aaPredicted RBP14.15□□□□□ -0.14
SNED1-205ENST00000405547 HEATR6Q6AI08 1181 aaKnown RBP14.15□□□□□ -0.14
SNED1-205ENST00000405547 ISCUQ9H1K1 167 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 CPVLQ9H3G5 476 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 PPLO60437 1756 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 SYCE1LA8MT33 242 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 F8W8V4 182 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 TNFAIP2Q03169 654 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 HIC1Q14526 733 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 DPP9Q86TI2 863 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 ZNF341Q9BYN7 854 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 CXorf56Q9H5V9 222 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 ZNF394Q53GI3 561 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 NEDD1Q8NHV4 660 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 ERGIC2Q96RQ1 377 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 EFTUD2Q15029 972 aaKnown RBP eCLIP14.15□□□□□ -0.14
SNED1-205ENST00000405547 RASSF3Q86WH2 238 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 DCPSQ96C86 337 aaKnown RBP14.15□□□□□ -0.14
SNED1-205ENST00000405547 MAGEB5Q9BZ81 275 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 CCT8L1PA6NM43 557 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 USP17L10C9JJH3 530 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 GALCP54803 685 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 PSMC1P62191 440 aaKnown RBP14.15□□□□□ -0.14
SNED1-205ENST00000405547 ZIM3Q96PE6 472 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 ZBTB18Q99592 522 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 FSD1LQ9BXM9 530 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 VPS11Q9H270 941 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 FAM8A1Q9UBU6 413 aa14.15□□□□□ -0.14
SNED1-205ENST00000405547 SLC16A4O15374 487 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 CIITAP33076 1130 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 SLC26A7Q8TE54 656 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 EPHB1P54762 984 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 TTC8Q8TAM2 541 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 RIN2Q8WYP3 895 aaPredicted RBP14.14□□□□□ -0.15
SNED1-205ENST00000405547 ADA2Q9NZK5 511 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 KCND2Q9NZV8 630 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 TRPC5Q9UL62 973 aaPredicted RBP14.14□□□□□ -0.15
SNED1-205ENST00000405547 SNAP23O00161 211 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 ELF1P32519 619 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 AP3M2P53677 418 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 ABCB11O95342 1321 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 BCAR1P56945 870 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 RBM43Q6ZSC3 357 aaKnown RBP14.14□□□□□ -0.15
SNED1-205ENST00000405547 RCOR2Q8IZ40 523 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 MTRQ99707 1265 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 MRGBPQ9NV56 204 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 FMO5P49326 533 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 XPO6Q96QU8 1125 aaKnown RBP14.14□□□□□ -0.15
SNED1-205ENST00000405547 MYH7P12883 1935 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 CTDNEP1O95476 244 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 YWHAHQ04917 246 aaPredicted RBP14.14□□□□□ -0.15
SNED1-205ENST00000405547 DUOXA2Q1HG44 320 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 DNAL1Q4LDG9 190 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 REXO1L1PQ8IX06 675 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 MAP3K14Q99558 947 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 ERP44Q9BS26 406 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 CD209Q9NNX6 404 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 SUGT1Q9Y2Z0 365 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 MYH15Q9Y2K3 1946 aa14.14□□□□□ -0.15
SNED1-205ENST00000405547 RNF103-CHMP3A0A140T963 221 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 SDC4P31431 198 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 ANKS1AQ92625 1134 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 FUT8Q9BYC5 575 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.13□□□□□ -0.15
SNED1-205ENST00000405547 RYBPQ8N488 228 aaPredicted RBP14.13□□□□□ -0.15
SNED1-205ENST00000405547 CEP19Q96LK0 163 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 TSSK1BQ9BXA7 367 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 SUCLA2Q9P2R7 463 aaPredicted RBP14.13□□□□□ -0.15
SNED1-205ENST00000405547 RAD51CO43502 376 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 QRICH1Q2TAL8 776 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 ANKRD12Q6UB98 2062 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 MAPRE2Q15555 327 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 RHPN2Q8IUC4 686 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 USP38Q8NB14 1042 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 GTSE1Q9NYZ3 720 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 NEXMIFQ5QGS0 1516 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 TRIM49P0CI25 452 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 TRIM49CP0CI26 452 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 OSBPP22059 807 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 TMEM259Q4ZIN3 620 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 SLC27A3Q5K4L6 730 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 TRAPPC11Q7Z392 1133 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 SYNE4Q8N205 404 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 KCTD17Q8N5Z5 321 aa14.13□□□□□ -0.15
SNED1-205ENST00000405547 OR6B3Q8NGW1 331 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms