RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 VN1R3Q9BXE9 311 aa14.68□□□□□ -0.06
SDF4-203ENST00000403997 CCDC113Q9H0I3 377 aa14.68□□□□□ -0.06
SDF4-203ENST00000403997 PDZD7Q9H5P4 517 aa14.68□□□□□ -0.06
SDF4-203ENST00000403997 STK39Q9UEW8 545 aa14.68□□□□□ -0.06
SDF4-203ENST00000403997 HCFC2Q9Y5Z7 792 aa14.68□□□□□ -0.06
SDF4-203ENST00000403997 IRAK3Q9Y616 596 aa14.68□□□□□ -0.06
SDF4-203ENST00000403997 VPS37CA5D8V6 355 aaPredicted RBP14.67□□□□□ -0.06
SDF4-203ENST00000403997 ALADP13716 330 aa14.67□□□□□ -0.06
SDF4-203ENST00000403997 HOXB8P17481 243 aaPredicted RBP14.67□□□□□ -0.06
SDF4-203ENST00000403997 DSC1Q08554 894 aa14.67□□□□□ -0.06
SDF4-203ENST00000403997 TPRNQ4KMQ1 711 aa14.67□□□□□ -0.06
SDF4-203ENST00000403997 HYIQ5T013 277 aa14.67□□□□□ -0.06
SDF4-203ENST00000403997 RINT1Q6NUQ1 792 aa14.67□□□□□ -0.06
SDF4-203ENST00000403997 C1orf186Q6ZWK4 172 aa14.67□□□□□ -0.06
SDF4-203ENST00000403997 BRAPQ7Z569 592 aa14.67□□□□□ -0.06
SDF4-203ENST00000403997 GSTCDQ8NEC7 633 aa14.67□□□□□ -0.06
SDF4-203ENST00000403997 CDK5RAP3Q96JB5 506 aa14.67□□□□□ -0.06
SDF4-203ENST00000403997 RPS6KC1Q96S38 1066 aa14.67□□□□□ -0.06
SDF4-203ENST00000403997 RUSC1Q9BVN2 902 aa14.67□□□□□ -0.06
SDF4-203ENST00000403997 COLEC11Q9BWP8 271 aa14.67□□□□□ -0.06
SDF4-203ENST00000403997 NT5C3AQ9H0P0 336 aa14.67□□□□□ -0.06
SDF4-203ENST00000403997 S1PR5Q9H228 398 aa14.67□□□□□ -0.06
SDF4-203ENST00000403997 MRPL17Q9NRX2 175 aaKnown RBP14.67□□□□□ -0.06
SDF4-203ENST00000403997 SFI1A8K8P3 1242 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 PDCP20941 246 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 KLRC2P26717 231 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 NPTX2P47972 431 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 DMP1Q13316 513 aaPredicted RBP14.66□□□□□ -0.06
SDF4-203ENST00000403997 PTPN14Q15678 1187 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 TMEM31Q5JXX7 168 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 NT5DC1Q5TFE4 455 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 EEF1DP3Q658K8 133 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 CABP7Q86V35 215 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 DAW1Q8N136 415 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 SUSD6Q92537 303 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 RPGRIP1Q96KN7 1286 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 DRC1Q96MC2 740 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 PNMA5Q96PV4 448 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 PHF7Q9BWX1 381 aaPredicted RBP14.66□□□□□ -0.06
SDF4-203ENST00000403997 EMILIN2Q9BXX0 1053 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 KMT5AQ9NQR1 393 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 MARCH5Q9NX47 278 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 SNTG2Q9NY99 539 aa14.66□□□□□ -0.06
SDF4-203ENST00000403997 C5orf42Q9H799 3197 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 FAM86C2PA6NEL3 165 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 C2CD2LO14523 706 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 DCXO43602 365 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 RECQL4O94761 1208 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 BMP15O95972 392 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 SOD2P04179 222 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 EDN1P05305 212 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 URODP06132 367 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 GUCY2CP25092 1073 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 RAD51AP2Q09MP3 1159 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 GRIK3Q13003 919 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 CBX2Q14781 532 aaPredicted RBP14.65□□□□□ -0.06
SDF4-203ENST00000403997 SF3A1Q15459 793 aaKnown RBP14.65□□□□□ -0.06
SDF4-203ENST00000403997 ATF7IP2Q5U623 682 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 CES5AQ6NT32 575 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 TAS1R1Q7RTX1 841 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 APBB1IPQ7Z5R6 666 aaPredicted RBP14.65□□□□□ -0.06
SDF4-203ENST00000403997 PPFIBP1Q86W92 1011 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 RNF135Q8IUD6 432 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 KCTD17Q8N5Z5 321 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 SYT2Q8N9I0 419 aaPredicted RBP14.65□□□□□ -0.06
SDF4-203ENST00000403997 SLC22A17Q8WUG5 538 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 RABGGTAQ92696 567 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 AK8Q96MA6 479 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 KLHL5Q96PQ7 755 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 LRFN3Q9BTN0 628 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 TIPINQ9BVW5 301 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 C17orf75Q9HAS0 396 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 SSX2IPQ9Y2D8 614 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 GDAQ9Y2T3 454 aa14.65□□□□□ -0.06
SDF4-203ENST00000403997 RBM19Q9Y4C8 960 aaKnown RBP14.65□□□□□ -0.06
SDF4-203ENST00000403997 ZMYM2Q9UBW7 1377 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 LOC730098B7Z3J9 87 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 F8W810 466 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 GPR37L1O60883 481 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 LILRB3O75022 631 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 TADA2AO75478 443 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 THP07101 528 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 CNPP09543 421 aaKnown RBP14.64□□□□□ -0.07
SDF4-203ENST00000403997 PLA2G4BP0C869 781 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 EPCAMP16422 314 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 UBA7P41226 1012 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 SLC12A3P55017 1021 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 MAPK7Q13164 816 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 DCAF4L1Q3SXM0 396 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 RARS2Q5T160 578 aaKnown RBP14.64□□□□□ -0.07
SDF4-203ENST00000403997 KIAA1841Q6NSI8 718 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 C12orf76Q8N812 135 aaPredicted RBP14.64□□□□□ -0.07
SDF4-203ENST00000403997 CALML4Q96GE6 196 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 HERC2P3Q9BVR0 1158 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 ADAM7Q9H2U9 754 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 TMEM134Q9H6X4 195 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 FOXD4L1Q9NU39 408 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 DZANK1Q9NVP4 752 aa14.64□□□□□ -0.07
SDF4-203ENST00000403997 SPDYE4A6NLX3 237 aa14.63□□□□□ -0.07
SDF4-203ENST00000403997 SLC16A4O15374 487 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms