RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 SOX10P56693 466 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 MIER3Q7Z3K6 550 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 RNF217Q8TC41 542 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.17■□□□□ 0.028e-7■■□□□ 13.2
ATG3-202ENST00000402314 FAM129AQ9BZQ8 928 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 ERVK-5Q9HDB9 667 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 C15orf41Q9Y2V0 281 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 BZW2Q9Y6E2 419 aaKnown RBP15.17■□□□□ 0.02
ATG3-202ENST00000402314 SLC26A4O43511 780 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 SARNPP82979 210 aaKnown RBP15.17■□□□□ 0.02
ATG3-202ENST00000402314 MYL7Q01449 175 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 SNX1Q13596 522 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 TRPM8Q7Z2W7 1104 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 THAP2Q9H0W7 228 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 SEMA4AQ9H3S1 761 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 FGFR1OP2Q9NVK5 253 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 FZD1Q9UP38 647 aa15.17■□□□□ 0.02
ATG3-202ENST00000402314 RGS16O15492 202 aaPredicted RBP15.16■□□□□ 0.02
ATG3-202ENST00000402314 AP1G2O75843 785 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 ZBTB48P10074 688 aaPredicted RBP15.16■□□□□ 0.02
ATG3-202ENST00000402314 MYCLP12524 364 aaPredicted RBP15.16■□□□□ 0.02
ATG3-202ENST00000402314 CAP2P40123 477 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 NPEPPSP55786 919 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 PPP3CAQ08209 521 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 UGCGQ16739 394 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 SEPT14Q6ZU15 432 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 CPNE8Q86YQ8 564 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 ARHGEF19Q8IW93 802 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 FBXO25Q8TCJ0 367 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 ECT2Q9H8V3 914 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 TMEM59LQ9UK28 342 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 NENFQ9UMX5 172 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 TRPC6Q9Y210 931 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 PTPN22Q9Y2R2 807 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 ZHX2Q9Y6X8 837 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 EIF3DO15371 548 aaKnown RBP eCLIP15.16■□□□□ 0.02
ATG3-202ENST00000402314 CALCAP01258 141 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 KRT16P08779 473 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 PLA2G4FQ68DD2 849 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 NT5DC3Q86UY8 548 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 VPS36Q86VN1 386 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 PLEKHO2Q8TD55 490 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 GMLQ99445 158 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 MXRA8Q9BRK3 442 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 KDM4CQ9H3R0 1056 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 UBE2TQ9NPD8 197 aaPredicted RBP15.16■□□□□ 0.02
ATG3-202ENST00000402314 ZNF536O15090 1300 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 EMSYQ7Z589 1322 aa15.16■□□□□ 0.02
ATG3-202ENST00000402314 COL4A5P29400 1685 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 ATMINO43313 823 aaPredicted RBP15.15■□□□□ 0.02
ATG3-202ENST00000402314 ATP9AO75110 1047 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 DNAJC8O75937 253 aaPredicted RBP15.15■□□□□ 0.02
ATG3-202ENST00000402314 FERP16591 822 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 ZNF131P52739 623 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 SPDYE2Q495Y8 402 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 LACTB2Q53H82 288 aaPredicted RBP15.15■□□□□ 0.02
ATG3-202ENST00000402314 RNF25Q96BH1 459 aaPredicted RBP15.15■□□□□ 0.02
ATG3-202ENST00000402314 ZNF317Q96PQ6 595 aaPredicted RBP15.15■□□□□ 0.02
ATG3-202ENST00000402314 STK33Q9BYT3 514 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 GGA2Q9UJY4 613 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 COG5Q9UP83 839 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 TELO2Q9Y4R8 837 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 C5orf60A6NFR6 353 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 LGR5O75473 907 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 MRPS9P82933 396 aaKnown RBP15.15■□□□□ 0.02
ATG3-202ENST00000402314 BFSP1Q12934 665 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 TNIP1Q15025 636 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 CAPRIN2Q6IMN6 1127 aaKnown RBP15.15■□□□□ 0.02
ATG3-202ENST00000402314 SLC30A5Q8TAD4 765 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 KLHL29Q96CT2 875 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 DMAC2Q9NW81 257 aa15.15■□□□□ 0.02
ATG3-202ENST00000402314 SLC16A4O15374 487 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 SP4Q02446 784 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 MAP2K1Q02750 393 aaPredicted RBP15.14■□□□□ 0.01
ATG3-202ENST00000402314 SLC15A2Q16348 729 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 DCAF12L1Q5VU92 463 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 SPDYE1Q8NFV5 336 aaPredicted RBP15.14■□□□□ 0.01
ATG3-202ENST00000402314 ZNF483Q8TF39 744 aaPredicted RBP15.14■□□□□ 0.01
ATG3-202ENST00000402314 TAAR1Q96RJ0 339 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 ZCWPW1Q9H0M4 648 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 KCNK9Q9NPC2 374 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 APEX2Q9UBZ4 518 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 DHX15O43143 795 aaKnown RBP15.14■□□□□ 0.01
ATG3-202ENST00000402314 PDHA1P08559 390 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 TNFAIP3P21580 790 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 AGBL2Q5U5Z8 902 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 DENND2CQ68D51 928 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 B3GNT9Q6UX72 402 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 CCDC26Q8TAB7 109 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 WNK4Q96J92 1243 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 POP1Q99575 1024 aaKnown RBP15.14■□□□□ 0.01
ATG3-202ENST00000402314 USP20Q9Y2K6 914 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 STXBP5LQ9Y2K9 1186 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 ASTN2O75129 1339 aaPredicted RBP15.14■□□□□ 0.01
ATG3-202ENST00000402314 TCP11X1B4DZS4 312 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 MARCKSL1P49006 195 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 PEX3P56589 373 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 MTMR3Q13615 1198 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 GNPTABQ3T906 1256 aa15.14■□□□□ 0.01
ATG3-202ENST00000402314 CCDC127Q96BQ5 260 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms