RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 FAM189A1O60320 539 aa17.44■□□□□ 0.38
HMGA1-204ENST00000401473 BAIAP3O94812 1187 aa17.44■□□□□ 0.38
HMGA1-204ENST00000401473 ACTN1P12814 892 aa17.44■□□□□ 0.38
HMGA1-204ENST00000401473 IBSPP21815 317 aaPredicted RBP17.44■□□□□ 0.38
HMGA1-204ENST00000401473 NLRP12P59046 1061 aa17.44■□□□□ 0.38
HMGA1-204ENST00000401473 ZNF568Q3ZCX4 644 aa17.44■□□□□ 0.38
HMGA1-204ENST00000401473 FAM109BQ6ICB4 259 aaPredicted RBP17.44■□□□□ 0.38
HMGA1-204ENST00000401473 CENPPQ6IPU0 288 aa17.44■□□□□ 0.38
HMGA1-204ENST00000401473 ZNF598Q86UK7 904 aaKnown RBP17.44■□□□□ 0.38
HMGA1-204ENST00000401473 ECHDC2Q86YB7 292 aa17.44■□□□□ 0.38
HMGA1-204ENST00000401473 CCDC51Q96ER9 411 aa17.44■□□□□ 0.38
HMGA1-204ENST00000401473 RNPC3Q96LT9 517 aaKnown RBP17.44■□□□□ 0.38
HMGA1-204ENST00000401473 MED15Q96RN5 788 aa17.44■□□□□ 0.38
HMGA1-204ENST00000401473 NXF3Q9H4D5 531 aaKnown RBP17.44■□□□□ 0.38
HMGA1-204ENST00000401473 PCIF1Q9H4Z3 704 aa17.44■□□□□ 0.38
HMGA1-204ENST00000401473 IPPQ9Y573 584 aa17.44■□□□□ 0.38
HMGA1-204ENST00000401473 SYCE3A1L190 88 aa17.43■□□□□ 0.38
HMGA1-204ENST00000401473 ZBBXA8MT70 800 aa17.43■□□□□ 0.38
HMGA1-204ENST00000401473 PDXKO00764 312 aa17.43■□□□□ 0.38
HMGA1-204ENST00000401473 ZCWPW2Q504Y3 356 aa17.43■□□□□ 0.38
HMGA1-204ENST00000401473 ZBTB41Q5SVQ8 909 aa17.43■□□□□ 0.38
HMGA1-204ENST00000401473 KLHL10Q6JEL2 608 aa17.43■□□□□ 0.38
HMGA1-204ENST00000401473 FAM43BQ6ZT52 329 aaPredicted RBP17.43■□□□□ 0.38
HMGA1-204ENST00000401473 MRPL10Q7Z7H8 261 aaKnown RBP17.43■□□□□ 0.38
HMGA1-204ENST00000401473 POMGNT1Q8WZA1 660 aa17.43■□□□□ 0.38
HMGA1-204ENST00000401473 LPPQ93052 612 aa17.43■□□□□ 0.38
HMGA1-204ENST00000401473 TOP1MTQ969P6 601 aa17.43■□□□□ 0.38
HMGA1-204ENST00000401473 ADPGKQ9BRR6 497 aa17.43■□□□□ 0.38
HMGA1-204ENST00000401473 GTPBP4Q9BZE4 634 aaKnown RBP17.43■□□□□ 0.38
HMGA1-204ENST00000401473 TRAF3IP3Q9Y228 551 aa17.43■□□□□ 0.38
HMGA1-204ENST00000401473 TRIM49BA6NDI0 452 aa17.42■□□□□ 0.38
HMGA1-204ENST00000401473 HARSP12081 509 aaKnown RBP17.42■□□□□ 0.38
HMGA1-204ENST00000401473 OSTNP61366 133 aa17.42■□□□□ 0.38
HMGA1-204ENST00000401473 NOLC1Q14978 699 aaKnown RBP eCLIP17.42■□□□□ 0.38
HMGA1-204ENST00000401473 ZSCAN23Q3MJ62 389 aa17.42■□□□□ 0.38
HMGA1-204ENST00000401473 ANKRD40Q6AI12 368 aa17.42■□□□□ 0.38
HMGA1-204ENST00000401473 THNSL1Q8IYQ7 743 aa17.42■□□□□ 0.38
HMGA1-204ENST00000401473 EEF2KMTQ96G04 330 aa17.42■□□□□ 0.38
HMGA1-204ENST00000401473 TRIM6Q9C030 488 aaPredicted RBP17.42■□□□□ 0.38
HMGA1-204ENST00000401473 CXCL16Q9H2A7 254 aa17.42■□□□□ 0.38
HMGA1-204ENST00000401473 C1orf112Q9NSG2 853 aa17.42■□□□□ 0.38
HMGA1-204ENST00000401473 TYW1Q9NV66 732 aaKnown RBP17.42■□□□□ 0.38
HMGA1-204ENST00000401473 CITO14578 2027 aa17.42■□□□□ 0.38
HMGA1-204ENST00000401473 MEFVO15553 781 aaPredicted RBP17.41■□□□□ 0.38
HMGA1-204ENST00000401473 EFCAB14O75071 495 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 UPP2O95045 317 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 KIF20AO95235 890 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 MCF2P10911 925 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 AKAP5P24588 427 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 TNFSF9P41273 254 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 MATR3P43243 847 aaKnown RBP eCLIP17.41■□□□□ 0.38
HMGA1-204ENST00000401473 AFF1P51825 1210 aaKnown RBP17.41■□□□□ 0.38
HMGA1-204ENST00000401473 SLFN12LQ6IEE8 588 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 SASS6Q6UVJ0 657 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 CRELD2Q6UXH1 353 aaPredicted RBP17.41■□□□□ 0.38
HMGA1-204ENST00000401473 AGMOQ6ZNB7 445 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 MLKLQ8NB16 471 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 FUCA2Q9BTY2 467 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 SNTG2Q9NY99 539 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 GARTP22102 1010 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 ACOT2P49753 483 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 DCAF4L1Q3SXM0 396 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 ARMCX5Q6P1M9 558 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 HS2ST1Q7LGA3 356 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 RNF169Q8NCN4 708 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 SAAL1Q96ER3 474 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 DHTKD1Q96HY7 919 aaPredicted RBP17.41■□□□□ 0.38
HMGA1-204ENST00000401473 MSTO1Q9BUK6 570 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 GZF1Q9H116 711 aaPredicted RBP17.41■□□□□ 0.38
HMGA1-204ENST00000401473 DMAC2Q9NW81 257 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 AGO2Q9UKV8 859 aaKnown RBP17.41■□□□□ 0.38
HMGA1-204ENST00000401473 SLC4A7Q9Y6M7 1214 aa17.41■□□□□ 0.38
HMGA1-204ENST00000401473 GOLGA8IPA6NC78 632 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 GOLGA8JA6NMD2 632 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 GRXCR1A8MXD5 290 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 PSMA7O14818 248 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 EOMESO95936 686 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 FGFR1P11362 822 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 CCNE1P24864 410 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 STX17P56962 302 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 TYRO3Q06418 890 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 NELFBQ8WX92 580 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 P2RX5Q93086 422 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 APOL6Q9BWW8 343 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 ELAC1Q9H777 363 aaKnown RBP17.4■□□□□ 0.38
HMGA1-204ENST00000401473 RNF19AQ9NV58 838 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 TMEM161AQ9NX61 479 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 HSPBP1Q9NZL4 362 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 PCDHB7Q9Y5E2 793 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 MYO9BQ13459 2157 aa17.4■□□□□ 0.38
HMGA1-204ENST00000401473 OGTO15294 1046 aa17.39■□□□□ 0.38
HMGA1-204ENST00000401473 LETM1O95202 739 aaPredicted RBP17.39■□□□□ 0.38
HMGA1-204ENST00000401473 STAG3L1P0CL83 205 aa17.39■□□□□ 0.38
HMGA1-204ENST00000401473 RAB27AP51159 221 aa17.39■□□□□ 0.38
HMGA1-204ENST00000401473 SNRPFP62306 86 aaKnown RBP17.39■□□□□ 0.38
HMGA1-204ENST00000401473 STIM1Q13586 685 aa17.39■□□□□ 0.38
HMGA1-204ENST00000401473 TTI2Q6NXR4 508 aa17.39■□□□□ 0.38
HMGA1-204ENST00000401473 FAM117BQ6P1L5 589 aa17.39■□□□□ 0.38
HMGA1-204ENST00000401473 C12orf56Q8IXR9 622 aa17.39■□□□□ 0.38
HMGA1-204ENST00000401473 TMEM174Q8WUU8 243 aa17.39■□□□□ 0.38
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