RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 KNOP1Q1ED39 458 aaKnown RBP10.15□□□□□ -0.78
CSMD1-202ENST00000400186 OLFML2BQ68BL8 750 aa10.15□□□□□ -0.78
CSMD1-202ENST00000400186 AGGF1Q8N302 714 aaeCLIP10.15□□□□□ -0.782e-8■■■■■ 37.2
CSMD1-202ENST00000400186 ZNF507Q8TCN5 953 aa10.15□□□□□ -0.78
CSMD1-202ENST00000400186 TSSK1BQ9BXA7 367 aa10.15□□□□□ -0.78
CSMD1-202ENST00000400186 AIPL1Q9NZN9 384 aa10.15□□□□□ -0.78
CSMD1-202ENST00000400186 KRT75O95678 551 aa10.15□□□□□ -0.79
CSMD1-202ENST00000400186 PRELPP51888 382 aa10.15□□□□□ -0.79
CSMD1-202ENST00000400186 GJC2Q5T442 439 aaPredicted RBP10.15□□□□□ -0.79
CSMD1-202ENST00000400186 IL17RAQ96F46 866 aa10.15□□□□□ -0.79
CSMD1-202ENST00000400186 ATG3Q9NT62 314 aa10.15□□□□□ -0.79
CSMD1-202ENST00000400186 USP17L5A8MUK1 530 aa10.15□□□□□ -0.79
CSMD1-202ENST00000400186 HNRNPRO43390 633 aaKnown RBP10.15□□□□□ -0.79
CSMD1-202ENST00000400186 ZNF394Q53GI3 561 aa10.15□□□□□ -0.79
CSMD1-202ENST00000400186 THEM5Q8N1Q8 247 aa10.15□□□□□ -0.79
CSMD1-202ENST00000400186 AFG1LQ8WV93 481 aa10.15□□□□□ -0.79
CSMD1-202ENST00000400186 PHF21AQ96BD5 680 aa10.15□□□□□ -0.79
CSMD1-202ENST00000400186 RNPC3Q96LT9 517 aaKnown RBP10.15□□□□□ -0.79
CSMD1-202ENST00000400186 GID8Q9NWU2 228 aa10.15□□□□□ -0.79
CSMD1-202ENST00000400186 HSPBP1Q9NZL4 362 aa10.15□□□□□ -0.79
CSMD1-202ENST00000400186 LRRC36Q1X8D7 754 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 ZNF568Q3ZCX4 644 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 USP15Q9Y4E8 981 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-202ENST00000400186 DDX5P17844 614 aaKnown RBP10.14□□□□□ -0.79
CSMD1-202ENST00000400186 CCDC15Q0P6D6 951 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 MED21Q13503 144 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 MTMR1Q13613 665 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 ANO4Q32M45 955 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 MDH1BQ5I0G3 518 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 SLC10A5Q5PT55 438 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 ADGRG1Q9Y653 693 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 CDC42BPAQ5VT25 1732 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 EIF3HO15372 352 aaKnown RBP eCLIP10.14□□□□□ -0.79
CSMD1-202ENST00000400186 KRT72Q14CN4 511 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 TMC4Q7Z404 712 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 FAM160B2Q86V87 743 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 DTX3LQ8TDB6 740 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 BCS1LQ9Y276 419 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 ATP10AO60312 1499 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 MAGI2Q86UL8 1455 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 FOXP2O15409 715 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 VAMP7P51809 220 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 HSPA2P54652 639 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 TSPY1Q01534 308 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 EFHC2Q5JST6 749 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 FAM102AQ5T9C2 384 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-202ENST00000400186 SCFD1Q8WVM8 642 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 FAM167AQ96KS9 214 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 GOLGA8RI6L899 631 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 DFFAO00273 331 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 NEMP1O14524 444 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 SERPINB1P30740 379 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 CCDC142Q17RM4 750 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 TAS2R42Q7RTR8 314 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 GIMAP8Q8ND71 665 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-202ENST00000400186 RFFLQ8WZ73 363 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 USP21Q9UK80 565 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 SMG5Q9UPR3 1016 aaKnown RBP10.14□□□□□ -0.79
CSMD1-202ENST00000400186 ANKARQ7Z5J8 1434 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 KRT87PA6NCN2 255 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 C16orf96A6NNT2 1141 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 C5orf58C9J3I9 102 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 CDH6P55285 790 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 AP3B2Q13367 1082 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 P3H1Q32P28 736 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 RC3H1Q5TC82 1133 aaKnown RBP10.14□□□□□ -0.79
CSMD1-202ENST00000400186 SYDE1Q6ZW31 735 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-202ENST00000400186 SRLQ86TD4 932 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 NLRP10Q86W26 655 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 TMA16Q96EY4 203 aaKnown RBP10.14□□□□□ -0.79
CSMD1-202ENST00000400186 SELENONQ9NZV5 590 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 NEDD4P46934 1319 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 POTEFA5A3E0 1075 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 ZNF189O75820 626 aaPredicted RBP10.14□□□□□ -0.79
CSMD1-202ENST00000400186 POTEIP0CG38 1075 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 PSMD7P51665 324 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 DEFA1P59665 94 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 DEFA3P59666 94 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 POTEGQ6S5H5 508 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 POTEEQ6S8J3 1075 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 C16orf89Q6UX73 402 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 STAG2Q8N3U4 1231 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 ABCB11O95342 1321 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 LOC102724428A0A0B4J2F2 783 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 MAFGO15525 162 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 PRPF4O43172 522 aaKnown RBP eCLIP10.14□□□□□ -0.79
CSMD1-202ENST00000400186 CHN1P15882 459 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 GPC3P51654 580 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 SIK1P57059 783 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 ELMSAN1Q6PJG2 1045 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 NDFIP2Q9NV92 336 aa10.14□□□□□ -0.79
CSMD1-202ENST00000400186 PRDM15P57071 1507 aaPredicted RBP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 POTECB2RU33 542 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 ORC4O43929 436 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 APBA3O96018 575 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 SUPT20HL1Q3ZLR7 823 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 MFN1Q8IWA4 741 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 PPHLN1Q8NEY8 458 aaKnown RBP10.13□□□□□ -0.79
CSMD1-202ENST00000400186 PLEKHF1Q96S99 279 aa10.13□□□□□ -0.79
CSMD1-202ENST00000400186 TRIM54Q9BYV2 358 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms