RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 ZW10O43264 779 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 CDK8P49336 464 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 USP17L1Q7RTZ2 530 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 CDR2LQ86X02 465 aaPredicted RBP14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 ZFATQ9P243 1243 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 SEPT3Q9UH03 358 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 MOSPD1Q9UJG1 213 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 MLXIPLQ9NP71 852 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 APOL1O14791 398 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 STAT4Q14765 748 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 RNF135Q8IUD6 432 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 SH3KBP1Q96B97 665 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 WDR19Q8NEZ3 1342 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 DEFA1P59665 94 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 DEFA3P59666 94 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 TWF2Q6IBS0 349 aaKnown RBP14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 TBC1D19Q8N5T2 526 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 TNIP2Q8NFZ5 429 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 PPCSQ9HAB8 311 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 TLR7Q9NYK1 1049 aaKnown RBP14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 POLR1AO95602 1720 aaPredicted RBP14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 PRPF4O43172 522 aaKnown RBP eCLIP14.17□□□□□ -0.142e-7■■■■□ 23.1
LDLRAD4-203ENST00000399848 UNC5CLQ8IV45 518 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 SLC24A3Q9HC58 644 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 MAD2L2Q9UI95 211 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 ZBTB5O15062 677 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 EIF2AK2P19525 551 aaKnown RBP14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 LAMB3Q13751 1172 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 NDFIP2Q9NV92 336 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 DOLKQ9UPQ8 538 aa14.17□□□□□ -0.14
LDLRAD4-203ENST00000399848 TFRCP02786 760 aaKnown RBP14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 SFNP31947 248 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 DNAL1Q4LDG9 190 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 OPTNQ96CV9 577 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 FAM20AQ96MK3 541 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 ZNF341Q9BYN7 854 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 NFRKBQ6P4R8 1299 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 EEPD1Q7L9B9 569 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 NLRP10Q86W26 655 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 SCN4BQ8IWT1 228 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 PPP1R2P1Q96PQ5 205 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 DDX50Q9BQ39 737 aaKnown RBP14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 PUS7LQ9H0K6 701 aaKnown RBP14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 UBN2Q6ZU65 1347 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 KRT14P02533 472 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 KCNA2P16389 499 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 GCLMP48507 274 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 PRUNE1Q86TP1 453 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 DGKHQ86XP1 1220 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 DDX42Q86XP3 938 aaKnown RBP eCLIP14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 PGBD3Q8N328 593 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.16□□□□□ -0.141e-6■■■■■ 62.7
LDLRAD4-203ENST00000399848 TMEM245Q9H330 911 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 BATF3Q9NR55 127 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 DENND3A2RUS2 1198 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 RCAN1P53805 252 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 KLC1Q07866 573 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 CEP95Q96GE4 821 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 ZSCAN32Q9NX65 697 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 MAP3K20Q9NYL2 800 aaKnown RBP14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 USP17L8P0C7I0 530 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 ZNF394Q53GI3 561 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 COG1Q8WTW3 980 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 RMDN3Q96TC7 470 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 TCP11X1B4DZS4 312 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 PYGMP11217 842 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 STXBP2Q15833 593 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 AASDHQ4L235 1098 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 C16orf89Q6UX73 402 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 MRPL4Q9BYD3 311 aaKnown RBP14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 MFSD1Q9H3U5 465 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 ARL2BPQ9Y2Y0 163 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 FTLP02792 175 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 CIAPIN1Q6FI81 312 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 FOXP4Q8IVH2 680 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 ASCC2Q9H1I8 757 aaPredicted RBP14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 EPN3Q9H201 632 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 ANKARQ7Z5J8 1434 aa14.16□□□□□ -0.14
LDLRAD4-203ENST00000399848 PRCPP42785 496 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 GUCY1A3Q02108 690 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 RUNX1T1Q06455 604 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 RAD51Q06609 339 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 RAD54LQ92698 747 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 TSPAN17Q96FV3 270 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 CHAMP1Q96JM3 812 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 FAM49AQ9H0Q0 323 aaPredicted RBP14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 OSBPL5Q9H0X9 879 aaPredicted RBP14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 PCDHB8Q9UN66 801 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 UBA6A0AVT1 1052 aaPredicted RBP14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 ERVV-1B6SEH8 477 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 ORC4O43929 436 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 VCAM1P19320 739 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 RANBP1P43487 201 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 FAM83BQ5T0W9 1011 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 ASAP3Q8TDY4 903 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 TADA1Q96BN2 335 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 PPP1R16BQ96T49 567 aa14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 PUS3Q9BZE2 481 aaKnown RBP14.15□□□□□ -0.14
LDLRAD4-203ENST00000399848 GDAQ9Y2T3 454 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms