RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 DUSP28Q4G0W2 176 aa10.24□□□□□ -0.77
LINC00243-201ENST00000399196 IQSEC1Q6DN90 963 aa10.24□□□□□ -0.77
LINC00243-201ENST00000399196 INTS8Q75QN2 995 aaKnown RBP10.24□□□□□ -0.77
LINC00243-201ENST00000399196 TRAPPC11Q7Z392 1133 aa10.24□□□□□ -0.77
LINC00243-201ENST00000399196 OR6J1Q8NGC5 347 aa10.24□□□□□ -0.77
LINC00243-201ENST00000399196 POMGNT1Q8WZA1 660 aa10.24□□□□□ -0.77
LINC00243-201ENST00000399196 EMID1Q96A84 441 aaPredicted RBP10.24□□□□□ -0.77
LINC00243-201ENST00000399196 ELMO3Q96BJ8 720 aa10.24□□□□□ -0.77
LINC00243-201ENST00000399196 POP1Q99575 1024 aaKnown RBP10.24□□□□□ -0.77
LINC00243-201ENST00000399196 HAPLN2Q9GZV7 340 aa10.24□□□□□ -0.77
LINC00243-201ENST00000399196 INTS2Q9H0H0 1204 aaKnown RBP10.24□□□□□ -0.77
LINC00243-201ENST00000399196 NUCKS1Q9H1E3 243 aaKnown RBP10.24□□□□□ -0.77
LINC00243-201ENST00000399196 PUF60Q9UHX1 559 aaKnown RBP10.24□□□□□ -0.77
LINC00243-201ENST00000399196 NENFQ9UMX5 172 aa10.24□□□□□ -0.77
LINC00243-201ENST00000399196 K7ERI5 159 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 PPFIA4O75335 1185 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 ZNF286BP0CG31 522 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 KLRC1P26715 233 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 PRKCIP41743 596 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 LIG4P49917 911 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 MYL7Q01449 175 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 TNFAIP2Q03169 654 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 BRDTQ58F21 947 aaPredicted RBP10.23□□□□□ -0.77
LINC00243-201ENST00000399196 IER5Q5VY09 327 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 ARHGEF19Q8IW93 802 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 METTL13Q8N6R0 699 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 MNS1Q8NEH6 495 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 PRPF31Q8WWY3 499 aaKnown RBP10.23□□□□□ -0.77
LINC00243-201ENST00000399196 PSPC1Q8WXF1 523 aaKnown RBP10.23□□□□□ -0.77
LINC00243-201ENST00000399196 SOCS4Q8WXH5 440 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 SPAG5Q96R06 1193 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 TOPORSQ9NS56 1045 aaPredicted RBP10.23□□□□□ -0.77
LINC00243-201ENST00000399196 DNAJC12Q9UKB3 198 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 MGAMO43451 1857 aa10.23□□□□□ -0.77
LINC00243-201ENST00000399196 EFCAB8A8MWE9 144 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 ZBTB42B2RXF5 422 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 F8VZ95 297 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 GFPT2O94808 682 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 IPO7O95373 1038 aaKnown RBP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 HOXC6P09630 235 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 H2AFXP16104 143 aaPredicted RBP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 IGBP1P78318 339 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 MXD4Q14582 209 aaPredicted RBP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 DRAP1Q14919 205 aaPredicted RBP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 SNRNP35Q16560 246 aaKnown RBP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 EPC2Q52LR7 807 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 PRAMEF19Q5SWL8 479 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 PAPD7Q5XG87 772 aaKnown RBP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 PDCL2Q8N4E4 241 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 LRRC71Q8N4P6 559 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 TRAPPC12Q8WVT3 735 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 SEMA4DQ92854 862 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 KAT5Q92993 513 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 SECISBP2LQ93073 1101 aaKnown RBP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 FBXL18Q96ME1 805 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 SYT11Q9BT88 431 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 TMEM117Q9H0C3 514 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 RNPEPQ9H4A4 650 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 MYO6Q9UM54 1294 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 ZNF236Q9UL36 1845 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 HTTP42858 3142 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 FAM170AA1A519 330 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 TTLL13PA6NNM8 815 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 LRRIQ3A6PVS8 624 aaPredicted RBP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 PDE2AO00408 941 aaPredicted RBP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 DDX3XO00571 662 aaKnown RBP eCLIP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 ZNF185O15231 689 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 BUB1O43683 1085 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 EVI5O60447 810 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 ALDH1A1P00352 501 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 SRGAP2CP0DJJ0 459 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 CYP2C19P33261 490 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 MATR3P43243 847 aaKnown RBP eCLIP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 CAPSQ13938 189 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 CCL14Q16627 93 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 DGKDQ16760 1214 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 SRGAP1Q7Z6B7 1085 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 EHBP1Q8NDI1 1231 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 PARD3BQ8TEW8 1205 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 ZBTB10Q96DT7 871 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 ZBTB45Q96K62 511 aaPredicted RBP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 APBA2Q99767 749 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 ZNF446Q9NWS9 450 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 FLRT1Q9NZU1 646 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 SUCLA2Q9P2R7 463 aaPredicted RBP10.22□□□□□ -0.77
LINC00243-201ENST00000399196 APEX2Q9UBZ4 518 aa10.22□□□□□ -0.77
LINC00243-201ENST00000399196 H3BRB1 525 aa10.21□□□□□ -0.77
LINC00243-201ENST00000399196 MAPK13O15264 365 aa10.21□□□□□ -0.77
LINC00243-201ENST00000399196 DYNC1LI2O43237 492 aaPredicted RBP10.21□□□□□ -0.77
LINC00243-201ENST00000399196 MMP3P08254 477 aa10.21□□□□□ -0.77
LINC00243-201ENST00000399196 INSRRP14616 1297 aa10.21□□□□□ -0.77
LINC00243-201ENST00000399196 EFNA5P52803 228 aa10.21□□□□□ -0.77
LINC00243-201ENST00000399196 CHMP4BP1P59074 171 aa10.21□□□□□ -0.77
LINC00243-201ENST00000399196 LAMTOR4Q0VGL1 99 aa10.21□□□□□ -0.77
LINC00243-201ENST00000399196 CETN1Q12798 172 aa10.21□□□□□ -0.77
LINC00243-201ENST00000399196 ZNF484Q5JVG2 852 aa10.21□□□□□ -0.77
LINC00243-201ENST00000399196 TEX35Q5T0J7 233 aa10.21□□□□□ -0.77
LINC00243-201ENST00000399196 EFCAB12Q6NXP0 572 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms