RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 GPATCH11Q8N954 259 aa20.99■□□□□ 0.95
COL13A1-205ENST00000398978 CHMP6Q96FZ7 201 aa20.99■□□□□ 0.95
COL13A1-205ENST00000398978 SYNGAP1Q96PV0 1343 aa20.99■□□□□ 0.95
COL13A1-205ENST00000398978 CETN1Q12798 172 aa20.99■□□□□ 0.95
COL13A1-205ENST00000398978 DHX34Q14147 1143 aaKnown RBP20.99■□□□□ 0.95
COL13A1-205ENST00000398978 HOOK3Q86VS8 718 aa20.99■□□□□ 0.95
COL13A1-205ENST00000398978 FAM187AA6NFU0 413 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 HGSO14964 777 aaPredicted RBP20.98■□□□□ 0.95
COL13A1-205ENST00000398978 MYCLP12524 364 aaPredicted RBP20.98■□□□□ 0.95
COL13A1-205ENST00000398978 FMO1Q01740 532 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 LMBRD2Q68DH5 695 aaPredicted RBP20.98■□□□□ 0.95
COL13A1-205ENST00000398978 ELAC2Q9BQ52 826 aaKnown RBP20.98■□□□□ 0.95
COL13A1-205ENST00000398978 NOCTQ9UK39 431 aaKnown RBP20.98■□□□□ 0.95
COL13A1-205ENST00000398978 CD2APQ9Y5K6 639 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 ATXN2Q99700 1313 aaKnown RBP20.98■□□□□ 0.95
COL13A1-205ENST00000398978 PPIP5K2O43314 1243 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 RTN2O75298 545 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 ENTPD3O75355 529 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 VIMP08670 466 aaKnown RBP20.98■□□□□ 0.95
COL13A1-205ENST00000398978 TAX1BP1Q86VP1 789 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 ACCSQ96QU6 501 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 FAM129AQ9BZQ8 928 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 QTRT2Q9H974 415 aaKnown RBP20.98■□□□□ 0.95
COL13A1-205ENST00000398978 CTNNAL1Q9UBT7 734 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 ALAS1P13196 640 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 SCTRP47872 440 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 RASA3Q14644 834 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 PPP1R7Q15435 360 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 B3GNT9Q6UX72 402 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 CHURC1Q8WUH1 139 aa20.98■□□□□ 0.95
COL13A1-205ENST00000398978 DIS3Q9Y2L1 958 aaKnown RBP20.98■□□□□ 0.95
COL13A1-205ENST00000398978 CHRNA3P32297 505 aa20.97■□□□□ 0.95
COL13A1-205ENST00000398978 COILP38432 576 aaPredicted RBP20.97■□□□□ 0.95
COL13A1-205ENST00000398978 SP4Q02446 784 aa20.97■□□□□ 0.95
COL13A1-205ENST00000398978 SLC13A5Q86YT5 568 aaPredicted RBP20.97■□□□□ 0.95
COL13A1-205ENST00000398978 SLC9A9Q8IVB4 645 aa20.97■□□□□ 0.95
COL13A1-205ENST00000398978 IPO4Q8TEX9 1081 aaKnown RBP20.97■□□□□ 0.95
COL13A1-205ENST00000398978 ATP9AO75110 1047 aa20.97■□□□□ 0.95
COL13A1-205ENST00000398978 KRT5P13647 590 aa20.97■□□□□ 0.95
COL13A1-205ENST00000398978 CTNNA2P26232 953 aa20.97■□□□□ 0.95
COL13A1-205ENST00000398978 ADSSP30520 456 aa20.97■□□□□ 0.95
COL13A1-205ENST00000398978 EIF3BP55884 814 aaKnown RBP20.97■□□□□ 0.95
COL13A1-205ENST00000398978 PRUNE1Q86TP1 453 aa20.97■□□□□ 0.95
COL13A1-205ENST00000398978 TAS1R2Q8TE23 839 aa20.97■□□□□ 0.95
COL13A1-205ENST00000398978 HVCN1Q96D96 273 aa20.97■□□□□ 0.95
COL13A1-205ENST00000398978 HERPUD2Q9BSE4 406 aa20.97■□□□□ 0.95
COL13A1-205ENST00000398978 INTS9Q9NV88 658 aaKnown RBP20.97■□□□□ 0.95
COL13A1-205ENST00000398978 PCDHA3Q9Y5H8 950 aa20.97■□□□□ 0.95
COL13A1-205ENST00000398978 ATP8B3O60423 1300 aa20.97■□□□□ 0.95
COL13A1-205ENST00000398978 UBE4BO95155 1302 aa20.97■□□□□ 0.95
COL13A1-205ENST00000398978 RBBP6Q7Z6E9 1792 aaKnown RBP20.96■□□□□ 0.95
COL13A1-205ENST00000398978 DHX15O43143 795 aaKnown RBP20.96■□□□□ 0.95
COL13A1-205ENST00000398978 YWHABP31946 246 aaKnown RBP20.96■□□□□ 0.95
COL13A1-205ENST00000398978 C11orf63Q6NUN7 778 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 RNF207Q6ZRF8 634 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 ATXN2LQ8WWM7 1075 aaKnown RBP20.96■□□□□ 0.95
COL13A1-205ENST00000398978 MRIQ9BWK5 157 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 H0YIN7 160 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 RIPK2O43353 540 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 P4HBP07237 508 aaKnown RBP20.96■□□□□ 0.95
COL13A1-205ENST00000398978 PAEPP09466 180 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 PLS3P13797 630 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 CHKAP35790 457 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 SCLT1Q96NL6 688 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 RAVER2Q9HCJ3 691 aaKnown RBP20.96■□□□□ 0.95
COL13A1-205ENST00000398978 CHST7Q9NS84 486 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 TMOD2Q9NZR1 351 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 TELO2Q9Y4R8 837 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 C21orf2O43822 256 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 NUDT17P0C025 328 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 MRPS9P82933 396 aaKnown RBP20.96■□□□□ 0.95
COL13A1-205ENST00000398978 SNRNP35Q16560 246 aaKnown RBP20.96■□□□□ 0.95
COL13A1-205ENST00000398978 FAM133BQ5BKY9 247 aaKnown RBP20.96■□□□□ 0.95
COL13A1-205ENST00000398978 KRT27Q7Z3Y8 459 aa20.96■□□□□ 0.95
COL13A1-205ENST00000398978 MTRF1LQ9UGC7 380 aaKnown RBP20.96■□□□□ 0.95
COL13A1-205ENST00000398978 ATRNL1Q5VV63 1379 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 C5orf60A6NFR6 353 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 MIF4GDA9UHW6 222 aaKnown RBP20.95■□□□□ 0.94
COL13A1-205ENST00000398978 RASSF9O75901 435 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 CYP11B1P15538 503 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 GJC1P36383 396 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 SIX1Q15475 284 aaPredicted RBP20.95■□□□□ 0.94
COL13A1-205ENST00000398978 XKR9Q5GH70 373 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 SEPT14Q6ZU15 432 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 ZNF317Q96PQ6 595 aaPredicted RBP20.95■□□□□ 0.94
COL13A1-205ENST00000398978 HEMGNQ9BXL5 484 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 O00370 1275 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 RASGRF2O14827 1237 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 SMTNP53814 917 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 TNIP1Q15025 636 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 FAM71AQ8IYT1 594 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 CD101Q93033 1021 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 TMEM206Q9H813 350 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 EHMT1Q9H9B1 1298 aa20.95■□□□□ 0.94
COL13A1-205ENST00000398978 TRPC5Q9UL62 973 aaPredicted RBP20.95■□□□□ 0.94
COL13A1-205ENST00000398978 MMP13P45452 471 aa20.94■□□□□ 0.94
COL13A1-205ENST00000398978 SETQ01105 290 aaPredicted RBP20.94■□□□□ 0.94
COL13A1-205ENST00000398978 TKFCQ3LXA3 575 aa20.94■□□□□ 0.94
COL13A1-205ENST00000398978 CEP57Q86XR8 500 aa20.94■□□□□ 0.94
COL13A1-205ENST00000398978 ANKRD42Q8N9B4 389 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms