RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 GPD1LQ8N335 351 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 IFT74Q96LB3 600 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 NT5C1BQ96P26 610 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 MAF1Q9H063 256 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 PDLIM7Q9NR12 457 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 RAB20Q9NX57 234 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 ALG6Q9Y672 507 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 ZNF541Q9H0D2 1346 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 GOLGA6L10A0A0M3HER8 536 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 SPATA31C2B4DYI2 1134 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 H0YCG3 227 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 SHOX2O60902 331 aaPredicted RBP14.92□□□□□ -0.02
PRAME-202ENST00000398743 KRT14P02533 472 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 CHRNB2P17787 502 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 GARTP22102 1010 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 ABCD1P33897 745 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 PDE6CP51160 858 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 TTMPQ5BVD1 217 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 MIS18BP1Q6P0N0 1132 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 UBL4BQ8N7F7 174 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 HELQQ8TDG4 1101 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 TAS1R2Q8TE23 839 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 ARL8AQ96BM9 186 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 BICD1Q96G01 975 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 PCDHB18PQ96TA0 734 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 XPNPEP1Q9NQW7 623 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 TOPORSQ9NS56 1045 aaPredicted RBP14.92□□□□□ -0.02
PRAME-202ENST00000398743 HOXC10Q9NYD6 342 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 TELO2Q9Y4R8 837 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 UTRNP46939 3433 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 RLFQ13129 1914 aa14.92□□□□□ -0.02
PRAME-202ENST00000398743 COL11A1P12107 1806 aaPredicted RBP14.92□□□□□ -0.02
PRAME-202ENST00000398743 ZNF233A6NK53 670 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 TTI1O43156 1089 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 DLATP10515 647 aaKnown RBP14.91□□□□□ -0.02
PRAME-202ENST00000398743 ENPEPQ07075 957 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 PPP2R5EQ16537 467 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 CD302Q8IX05 232 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 PIK3R5Q8WYR1 880 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 UTP11Q9Y3A2 253 aaKnown RBP14.91□□□□□ -0.02
PRAME-202ENST00000398743 MYPNQ86TC9 1320 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 SYNGAP1Q96PV0 1343 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 SPDYE16A6NNV3 312 aaPredicted RBP14.91□□□□□ -0.02
PRAME-202ENST00000398743 MMEP08473 750 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 CYP11B1P15538 503 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 PTENP60484 403 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 FMO1Q01740 532 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 XKR3Q5GH77 459 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 NAA35Q5VZE5 725 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 LRRC31Q6UY01 552 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 SV2AQ7L0J3 742 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 DDX42Q86XP3 938 aaKnown RBP eCLIP14.91□□□□□ -0.02
PRAME-202ENST00000398743 PROCA1Q8NCQ7 364 aaPredicted RBP14.91□□□□□ -0.02
PRAME-202ENST00000398743 TRPM4Q8TD43 1214 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 ALG3Q92685 438 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 LRRC45Q96CN5 670 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 POLR3FQ9H1D9 316 aaPredicted RBP14.91□□□□□ -0.02
PRAME-202ENST00000398743 ACP6Q9NPH0 428 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 ARHGAP28Q9P2N2 729 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 KCNG1Q9UIX4 513 aa14.91□□□□□ -0.02
PRAME-202ENST00000398743 SORBS3O60504 671 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 MTA2O94776 668 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 SUPT20HL2P0C7V6 817 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 CDR2Q01850 454 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 POU5F1Q01860 360 aaKnown RBP14.9□□□□□ -0.02
PRAME-202ENST00000398743 SUPT20HL1Q3ZLR7 823 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 MTERF2Q49AM1 385 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 NOL9Q5SY16 702 aaKnown RBP14.9□□□□□ -0.02
PRAME-202ENST00000398743 SEC14L1Q92503 715 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 RPS6KC1Q96S38 1066 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 FAM213AQ9BRX8 229 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 CELF4Q9BZC1 486 aaKnown RBP14.9□□□□□ -0.02
PRAME-202ENST00000398743 GGA3Q9NZ52 723 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 AFG3L2Q9Y4W6 797 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 PPP2R3BQ9Y5P8 575 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 DAPK3O43293 454 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 POLGP54098 1239 aaPredicted RBP14.9□□□□□ -0.02
PRAME-202ENST00000398743 ZNF211Q13398 564 aaPredicted RBP14.9□□□□□ -0.02
PRAME-202ENST00000398743 STXBP2Q15833 593 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 ENOSF1Q7L5Y1 443 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 TAS1R3Q7RTX0 852 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 MORC4Q8TE76 937 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 ZSWIM1Q9BR11 485 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 CAPS2Q9BXY5 557 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 RAB17Q9H0T7 212 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 NEUROG2Q9H2A3 272 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 FAM114A2Q9NRY5 505 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 NR2E1Q9Y466 385 aa14.9□□□□□ -0.02
PRAME-202ENST00000398743 TMEM110-MUSTN1A8MSY1 372 aa14.89□□□□□ -0.03
PRAME-202ENST00000398743 ZC3H11AO75152 810 aaKnown RBP eCLIP14.89□□□□□ -0.035e-24■□□□□ 10.9
PRAME-202ENST00000398743 LIG4P49917 911 aa14.89□□□□□ -0.03
PRAME-202ENST00000398743 GCNT1Q02742 428 aa14.89□□□□□ -0.03
PRAME-202ENST00000398743 MESDQ14696 234 aa14.89□□□□□ -0.03
PRAME-202ENST00000398743 EMC2Q15006 297 aa14.89□□□□□ -0.03
PRAME-202ENST00000398743 DNERQ8NFT8 737 aa14.89□□□□□ -0.03
PRAME-202ENST00000398743 KIAA1586Q9HCI6 787 aa14.89□□□□□ -0.03
PRAME-202ENST00000398743 PLAAQ9Y263 795 aa14.89□□□□□ -0.03
PRAME-202ENST00000398743 CD2APQ9Y5K6 639 aa14.89□□□□□ -0.03
PRAME-202ENST00000398743 ARID2Q68CP9 1835 aa14.89□□□□□ -0.03
PRAME-202ENST00000398743 ATMINO43313 823 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms