RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 STK39Q9UEW8 545 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 HES2Q9Y543 173 aa14.83□□□□□ -0.04
VCX3A-202ENST00000398729 A0A1B0GUA9 196 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 ARL5CA6NH57 179 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 INPPL1O15357 1258 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 GFRA3O60609 400 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 CTSAP10619 480 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 MLH1P40692 756 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 MAPK6Q16659 721 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 FAM187BQ17R55 369 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 ANKRD54Q6NXT1 300 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 LLGL2Q6P1M3 1020 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 SYCE2Q6PIF2 218 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 CASP10Q92851 521 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 IFT74Q96LB3 600 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 APOL6Q9BWW8 343 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 RNF39Q9H2S5 420 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 FZD8Q9H461 694 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 NXF3Q9H4D5 531 aaKnown RBP14.82□□□□□ -0.04
VCX3A-202ENST00000398729 DNM3Q9UQ16 869 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 FAN1Q9Y2M0 1017 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 GIT1Q9Y2X7 761 aa14.82□□□□□ -0.04
VCX3A-202ENST00000398729 ZNF292O60281 2723 aa14.81□□□□□ -0.04
VCX3A-202ENST00000398729 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.81□□□□□ -0.04
VCX3A-202ENST00000398729 PP2D1A8MPX8 630 aa14.81□□□□□ -0.04
VCX3A-202ENST00000398729 H0Y858 1186 aa14.81□□□□□ -0.04
VCX3A-202ENST00000398729 B4GALT3O60512 393 aa14.81□□□□□ -0.04
VCX3A-202ENST00000398729 NPTXRO95502 500 aa14.81□□□□□ -0.04
VCX3A-202ENST00000398729 HOXB8P17481 243 aaPredicted RBP14.81□□□□□ -0.04
VCX3A-202ENST00000398729 ATP2C1P98194 919 aaPredicted RBP14.81□□□□□ -0.04
VCX3A-202ENST00000398729 IL17AQ16552 155 aa14.81□□□□□ -0.04
VCX3A-202ENST00000398729 PTPN21Q16825 1174 aa14.81□□□□□ -0.04
VCX3A-202ENST00000398729 TMEM132AQ24JP5 1023 aa14.81□□□□□ -0.04
VCX3A-202ENST00000398729 LARP1BQ659C4 914 aaKnown RBP14.81□□□□□ -0.04
VCX3A-202ENST00000398729 CDR2LQ86X02 465 aaPredicted RBP14.81□□□□□ -0.04
VCX3A-202ENST00000398729 BCL7CQ8WUZ0 217 aaPredicted RBP14.81□□□□□ -0.04
VCX3A-202ENST00000398729 BSNDQ8WZ55 320 aa14.81□□□□□ -0.04
VCX3A-202ENST00000398729 KIFAP3Q92845 792 aa14.81□□□□□ -0.04
VCX3A-202ENST00000398729 ATOH1Q92858 354 aaPredicted RBP14.81□□□□□ -0.04
VCX3A-202ENST00000398729 HCFC2Q9Y5Z7 792 aa14.81□□□□□ -0.04
VCX3A-202ENST00000398729 IRAK3Q9Y616 596 aa14.81□□□□□ -0.04
VCX3A-202ENST00000398729 TDRD15B5MCY1 1934 aaKnown RBP14.8□□□□□ -0.04
VCX3A-202ENST00000398729 NRP1O14786 923 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 N4BP3O15049 544 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 CLASP2O75122 1294 aaKnown RBP14.8□□□□□ -0.04
VCX3A-202ENST00000398729 NR1I2O75469 434 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 PRKCBP05771 671 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 AKAP5P24588 427 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 CDC25AP30304 524 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 OR1G1P47890 313 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 SCNN1GP51170 649 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 EFNA5P52803 228 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 PRPF4BQ13523 1007 aaKnown RBP14.8□□□□□ -0.04
VCX3A-202ENST00000398729 TPRNQ4KMQ1 711 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 COLGALT2Q8IYK4 626 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 RIPOR3Q96MK2 946 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 ZFP42Q96MM3 310 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 ADPGKQ9BRR6 497 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 PARP2Q9UGN5 583 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 CDH22Q9UJ99 828 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 PRG3Q9Y2Y8 225 aaPredicted RBP14.8□□□□□ -0.04
VCX3A-202ENST00000398729 ZMYM2Q9UBW7 1377 aa14.8□□□□□ -0.04
VCX3A-202ENST00000398729 EP300Q09472 2414 aaPredicted RBP14.8□□□□□ -0.04
VCX3A-202ENST00000398729 E9PMD0 336 aa14.79□□□□□ -0.04
VCX3A-202ENST00000398729 ACKR2O00590 384 aa14.79□□□□□ -0.04
VCX3A-202ENST00000398729 LIG1P18858 919 aa14.79□□□□□ -0.04
VCX3A-202ENST00000398729 DSC1Q08554 894 aa14.79□□□□□ -0.04
VCX3A-202ENST00000398729 AUTS2Q8WXX7 1259 aa14.79□□□□□ -0.04
VCX3A-202ENST00000398729 RPS6KC1Q96S38 1066 aa14.79□□□□□ -0.04
VCX3A-202ENST00000398729 MMTAG2Q9BU76 263 aaKnown RBP14.79□□□□□ -0.04
VCX3A-202ENST00000398729 APOL5Q9BWW9 433 aa14.79□□□□□ -0.04
VCX3A-202ENST00000398729 VN1R3Q9BXE9 311 aa14.79□□□□□ -0.04
VCX3A-202ENST00000398729 CCDC113Q9H0I3 377 aa14.79□□□□□ -0.04
VCX3A-202ENST00000398729 PDZD7Q9H5P4 517 aa14.79□□□□□ -0.04
VCX3A-202ENST00000398729 POLD4Q9HCU8 107 aa14.79□□□□□ -0.04
VCX3A-202ENST00000398729 MIOSQ9NXC5 875 aa14.79□□□□□ -0.04
VCX3A-202ENST00000398729 DAXXQ9UER7 740 aaPredicted RBP14.79□□□□□ -0.04
VCX3A-202ENST00000398729 VWA3AA6NCI4 1184 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 TTLL13PA6NNM8 815 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 PROB1E7EW31 1015 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 GRIK3Q13003 919 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 PTPN14Q15678 1187 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 ZRSR1Q15695 479 aaKnown RBP14.78□□□□□ -0.04
VCX3A-202ENST00000398729 ARL6IP4Q66PJ3 421 aaKnown RBP14.78□□□□□ -0.04
VCX3A-202ENST00000398729 CES5AQ6NT32 575 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 ASCL5Q7RTU5 278 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 PPFIBP1Q86W92 1011 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 KIFC3Q9BVG8 833 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 EMILIN2Q9BXX0 1053 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 NT5C3AQ9H0P0 336 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 MRPL17Q9NRX2 175 aaKnown RBP14.78□□□□□ -0.04
VCX3A-202ENST00000398729 MARCH5Q9NX47 278 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 KLK14Q9P0G3 267 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 SSX2IPQ9Y2D8 614 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 PLXNA3P51805 1871 aa14.78□□□□□ -0.04
VCX3A-202ENST00000398729 CCDC169A6NNP5 214 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 K7ERI5 159 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 HIP1RO75146 1068 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 SOD2P04179 222 aa14.77□□□□□ -0.05
VCX3A-202ENST00000398729 SSBP05455 408 aaKnown RBP eCLIP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms