RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ABCD1P33897 745 aa27.8■■■□□ 2.04
TMEM55B-202ENST00000398020 MATR3P43243 847 aaKnown RBP eCLIP27.8■■■□□ 2.04
TMEM55B-202ENST00000398020 FXR1P51114 621 aaKnown RBP eCLIP27.8■■■□□ 2.04
TMEM55B-202ENST00000398020 BTG3Q14201 252 aaPredicted RBP27.8■■■□□ 2.04
TMEM55B-202ENST00000398020 L1TD1Q5T7N2 865 aaKnown RBP27.8■■■□□ 2.04
TMEM55B-202ENST00000398020 MPZL3Q6UWV2 235 aa27.8■■■□□ 2.04
TMEM55B-202ENST00000398020 ABI1Q8IZP0 508 aa27.8■■■□□ 2.04
TMEM55B-202ENST00000398020 SLC28A3Q9HAS3 691 aa27.8■■■□□ 2.04
TMEM55B-202ENST00000398020 FNDC1Q4ZHG4 1894 aaPredicted RBP27.8■■■□□ 2.04
TMEM55B-202ENST00000398020 DCAF4L1Q3SXM0 396 aa27.79■■■□□ 2.04
TMEM55B-202ENST00000398020 PPP2R2DQ66LE6 453 aa27.79■■■□□ 2.04
TMEM55B-202ENST00000398020 SLC39A4Q6P5W5 647 aa27.79■■■□□ 2.04
TMEM55B-202ENST00000398020 CEP120Q8N960 986 aa27.79■■■□□ 2.04
TMEM55B-202ENST00000398020 SP7Q8TDD2 431 aaPredicted RBP27.79■■■□□ 2.04
TMEM55B-202ENST00000398020 HVCN1Q96D96 273 aa27.79■■■□□ 2.04
TMEM55B-202ENST00000398020 ACCSQ96QU6 501 aa27.79■■■□□ 2.04
TMEM55B-202ENST00000398020 HAPLN2Q9GZV7 340 aa27.79■■■□□ 2.04
TMEM55B-202ENST00000398020 INPP5FQ9Y2H2 1132 aa27.79■■■□□ 2.04
TMEM55B-202ENST00000398020 LINC01553A4QN01 128 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 ANKRD63C9JTQ0 380 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 OSTNP61366 133 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 STK4Q13043 487 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 CASD1Q96PB1 797 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 SNTG2Q9NY99 539 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 HCSTQ9UBK5 93 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 GOLGA6L22H0YM25 854 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 CLDN3O15551 220 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 HOXA2O43364 376 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 PIGRP01833 764 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 AFF1P51825 1210 aaKnown RBP27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 ALCAMQ13740 583 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 EPM2AIP1Q7L775 607 aaPredicted RBP27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 SYCP3Q8IZU3 236 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 TMEM117Q9H0C3 514 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 RSAD1Q9HA92 442 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 KLK14Q9P0G3 267 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 PARP2Q9UGN5 583 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 GDAQ9Y2T3 454 aa27.78■■■□□ 2.04
TMEM55B-202ENST00000398020 TAP1Q03518 808 aa27.77■■■□□ 2.04
TMEM55B-202ENST00000398020 NOLC1Q14978 699 aaKnown RBP eCLIP27.77■■■□□ 2.04
TMEM55B-202ENST00000398020 SEZ6Q53EL9 994 aa27.77■■■□□ 2.04
TMEM55B-202ENST00000398020 GLB1LQ6UWU2 654 aa27.77■■■□□ 2.04
TMEM55B-202ENST00000398020 STXBP4Q6ZWJ1 553 aa27.77■■■□□ 2.04
TMEM55B-202ENST00000398020 THNSL1Q8IYQ7 743 aa27.77■■■□□ 2.04
TMEM55B-202ENST00000398020 FIBCD1Q8N539 461 aa27.77■■■□□ 2.04
TMEM55B-202ENST00000398020 KIAA0895Q8NCT3 520 aa27.77■■■□□ 2.04
TMEM55B-202ENST00000398020 CERS4Q9HA82 394 aa27.77■■■□□ 2.04
TMEM55B-202ENST00000398020 HOOK1Q9UJC3 728 aaKnown RBP27.77■■■□□ 2.04
TMEM55B-202ENST00000398020 MTUS1Q9ULD2 1270 aa27.77■■■□□ 2.04
TMEM55B-202ENST00000398020 OFD1O75665 1012 aa27.76■■■□□ 2.03
TMEM55B-202ENST00000398020 MCF2P10911 925 aa27.76■■■□□ 2.03
TMEM55B-202ENST00000398020 HOXD13P35453 343 aa27.76■■■□□ 2.03
TMEM55B-202ENST00000398020 MLH1P40692 756 aa27.76■■■□□ 2.03
TMEM55B-202ENST00000398020 APBB1IPQ7Z5R6 666 aaPredicted RBP27.76■■■□□ 2.03
TMEM55B-202ENST00000398020 NELFCDQ8IXH7 590 aa27.76■■■□□ 2.03
TMEM55B-202ENST00000398020 TMEM192Q8IY95 271 aa27.76■■■□□ 2.03
TMEM55B-202ENST00000398020 CMTR2Q8IYT2 770 aaKnown RBP27.76■■■□□ 2.03
TMEM55B-202ENST00000398020 HACE1Q8IYU2 909 aa27.76■■■□□ 2.03
TMEM55B-202ENST00000398020 SCFD1Q8WVM8 642 aa27.76■■■□□ 2.03
TMEM55B-202ENST00000398020 ZFP42Q96MM3 310 aa27.76■■■□□ 2.03
TMEM55B-202ENST00000398020 EXOC7Q9UPT5 735 aa27.76■■■□□ 2.03
TMEM55B-202ENST00000398020 PCDHA5Q9Y5H7 936 aa27.76■■■□□ 2.03
TMEM55B-202ENST00000398020 MRPL42Q9Y6G3 142 aaKnown RBP27.76■■■□□ 2.03
TMEM55B-202ENST00000398020 MCL1Q07820 350 aa27.75■■■□□ 2.03
TMEM55B-202ENST00000398020 CAMK4Q16566 473 aa27.75■■■□□ 2.03
TMEM55B-202ENST00000398020 CCDC47Q96A33 483 aaKnown RBP27.75■■■□□ 2.03
TMEM55B-202ENST00000398020 FAM161BQ96MY7 647 aa27.75■■■□□ 2.03
TMEM55B-202ENST00000398020 GAD1Q99259 594 aa27.75■■■□□ 2.03
TMEM55B-202ENST00000398020 TTYH1Q9H313 450 aaPredicted RBP27.75■■■□□ 2.03
TMEM55B-202ENST00000398020 ZMYM2Q9UBW7 1377 aa27.75■■■□□ 2.03
TMEM55B-202ENST00000398020 EIF3DO15371 548 aaKnown RBP eCLIP27.75■■■□□ 2.03
TMEM55B-202ENST00000398020 RHOBTB3O94955 611 aa27.75■■■□□ 2.03
TMEM55B-202ENST00000398020 PSMD2Q13200 908 aa27.75■■■□□ 2.03
TMEM55B-202ENST00000398020 LRRC55Q6ZSA7 311 aa27.75■■■□□ 2.03
TMEM55B-202ENST00000398020 ZNF507Q8TCN5 953 aa27.75■■■□□ 2.03
TMEM55B-202ENST00000398020 CXCL16Q9H2A7 254 aa27.75■■■□□ 2.03
TMEM55B-202ENST00000398020 TYW1Q9NV66 732 aaKnown RBP27.75■■■□□ 2.03
TMEM55B-202ENST00000398020 ARL5CA6NH57 179 aa27.74■■■□□ 2.03
TMEM55B-202ENST00000398020 RECQL4O94761 1208 aa27.74■■■□□ 2.03
TMEM55B-202ENST00000398020 C17orf80Q9BSJ5 609 aa27.74■■■□□ 2.03
TMEM55B-202ENST00000398020 ZNF576Q9H609 170 aa27.74■■■□□ 2.03
TMEM55B-202ENST00000398020 TMEM206Q9H813 350 aa27.74■■■□□ 2.03
TMEM55B-202ENST00000398020 KCNB1Q14721 858 aa27.73■■■□□ 2.03
TMEM55B-202ENST00000398020 NOMO2Q5JPE7 1267 aa27.73■■■□□ 2.03
TMEM55B-202ENST00000398020 Q7L0L9 218 aa27.73■■■□□ 2.03
TMEM55B-202ENST00000398020 SMARCE1Q969G3 411 aa27.73■■■□□ 2.03
TMEM55B-202ENST00000398020 MSTO1Q9BUK6 570 aa27.73■■■□□ 2.03
TMEM55B-202ENST00000398020 UBN1Q9NPG3 1134 aa27.73■■■□□ 2.03
TMEM55B-202ENST00000398020 GIT1Q9Y2X7 761 aa27.73■■■□□ 2.03
TMEM55B-202ENST00000398020 A0A0B4J269 797 aa27.72■■■□□ 2.03
TMEM55B-202ENST00000398020 SMC2O95347 1197 aa27.72■■■□□ 2.03
TMEM55B-202ENST00000398020 POMCP01189 267 aa27.72■■■□□ 2.03
TMEM55B-202ENST00000398020 ADSSP30520 456 aa27.72■■■□□ 2.03
TMEM55B-202ENST00000398020 GRM5P41594 1212 aa27.72■■■□□ 2.03
TMEM55B-202ENST00000398020 ZBTB41Q5SVQ8 909 aa27.72■■■□□ 2.03
TMEM55B-202ENST00000398020 SPOUT1Q5T280 376 aaKnown RBP27.72■■■□□ 2.03
TMEM55B-202ENST00000398020 ZNF697Q5TEC3 545 aa27.72■■■□□ 2.03
TMEM55B-202ENST00000398020 ELOA2Q8IYF1 753 aaPredicted RBP27.72■■■□□ 2.03
TMEM55B-202ENST00000398020 GPT2Q8TD30 523 aa27.72■■■□□ 2.03
TMEM55B-202ENST00000398020 MAPK8IP1Q9UQF2 711 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms