RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 DYDC2Q96IM9 177 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 RNF216Q9NWF9 866 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-206ENST00000397617 GAS8O95995 478 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 ARP10275 920 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 ALDH5A1P51649 535 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-206ENST00000397617 SMIM5Q71RC9 77 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 CREG2Q8IUH2 290 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 IVNS1ABPQ9Y6Y0 642 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 TRIM49BA6NDI0 452 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 K7ENM7 598 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 RPS6KA5O75582 802 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 ERLIN2O94905 339 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 PHKA2P46019 1235 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 DUOXA2Q1HG44 320 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 WDR44Q5JSH3 913 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 BEND6Q5SZJ8 279 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-206ENST00000397617 CC2D1AQ6P1N0 951 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-206ENST00000397617 SPICE1Q8N0Z3 855 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 STAMQ92783 540 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 HSPBP1Q9NZL4 362 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 A0A087X0T9 212 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 MANSC4A6NHS7 340 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-206ENST00000397617 RTN2O75298 545 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 FAM228BP0C875 321 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 CYP2C8P10632 490 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 TSHRP16473 764 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 HOXC8P31273 242 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 ZNF569Q5MCW4 686 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 BEND5Q7L4P6 421 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 DYMQ7RTS9 669 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 GPRC5AQ8NFJ5 357 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 SOCS4Q8WXH5 440 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 UNC45AQ9H3U1 944 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 FETUBQ9UGM5 382 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 OPA1O60313 960 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 EVI5O60447 810 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 RGS20O76081 388 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 UBA1P22314 1058 aaKnown RBP6.32□□□□□ -1.4
PTPRD-206ENST00000397617 PTENP60484 403 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 CYP1B1Q16678 543 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 USH1GQ495M9 461 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 SLC35F6Q8N357 371 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 LINC01465Q8N7H1 131 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 APBB2Q92870 758 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 TRAIPQ9BWF2 469 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 LHX5Q9H2C1 402 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 SIX2Q9NPC8 291 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 KMT5AQ9NQR1 393 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 AMFRQ9UKV5 643 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 A6NJR5 290 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 COL6A1P12109 1028 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 PRMT2P55345 433 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 MEI1Q5TIA1 1274 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 ZDHHC17Q8IUH5 632 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 PPTC7Q8NI37 304 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 EPS8L1Q8TE68 723 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 CGRRF1Q99675 332 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 RGL1Q9NZL6 768 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 ADAMTS1Q9UHI8 967 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 LRRC37A2A6NM11 1700 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 MSCO60682 206 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 FARP2O94887 1054 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-206ENST00000397617 CLTAP09496 248 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 MYL7Q01449 175 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 CYP4A11Q02928 519 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 CYP24A1Q07973 514 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 MIGA2Q7L4E1 593 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 TTC13Q8NBP0 860 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 DEPTORQ8TB45 409 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 AGBL1Q96MI9 1066 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.32□□□□□ -1.4
PTPRD-206ENST00000397617 TRIM62Q9BVG3 475 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 STMN4Q9H169 189 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-206ENST00000397617 PCDHGC3Q9UN70 934 aa6.32□□□□□ -1.4
PTPRD-206ENST00000397617 EIF2AK2P19525 551 aaKnown RBP6.31□□□□□ -1.4
PTPRD-206ENST00000397617 PROZP22891 400 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 GPC5P78333 572 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 JAG1P78504 1218 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 PRKCEQ02156 737 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 SGSM1Q2NKQ1 1148 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 TCERG1LQ5VWI1 586 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 PHF13Q86YI8 300 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-206ENST00000397617 USP6NLQ92738 828 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 GJA10Q969M2 543 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 OSBPL9Q96SU4 736 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 CHP1Q99653 195 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 CRACR2AQ9BSW2 395 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 ZNF302Q9NR11 478 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 AGPAT5Q9NUQ2 364 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 COL20A1Q9P218 1284 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 MBLAC1A4D2B0 266 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-206ENST00000397617 SOWAHDA6NJG2 315 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 RASSF10A6NK89 507 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 PNMA6AP0CW24 399 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-206ENST00000397617 PRPF4BQ13523 1007 aaKnown RBP6.31□□□□□ -1.4
PTPRD-206ENST00000397617 SV2AQ7L0J3 742 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 UNC93AQ86WB7 457 aa6.31□□□□□ -1.4
PTPRD-206ENST00000397617 TOPORSQ9NS56 1045 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-206ENST00000397617 PES1O00541 588 aaKnown RBP6.31□□□□□ -1.4
PTPRD-206ENST00000397617 USP2O75604 605 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms