RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 SCP2P22307 547 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 GPC5P78333 572 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 JAG1P78504 1218 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 DUOXA2Q1HG44 320 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 OTOP1Q7RTM1 612 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 DAGLBQ8NCG7 672 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 IQCDQ96DY2 449 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 MTMR12Q9C0I1 747 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 CYP26B1Q9NR63 512 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 SETD4Q9NVD3 440 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 APEX2Q9UBZ4 518 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 BCL9LQ86UU0 1499 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 RARRES1P49788 294 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 MNAT1P51948 309 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 MRPS9P82933 396 aaKnown RBP11.93□□□□□ -0.5
IFT140-202ENST00000397417 CCDC38Q502W7 563 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 DARS2Q6PI48 645 aaKnown RBP11.93□□□□□ -0.5
IFT140-202ENST00000397417 FAM83AQ86UY5 434 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 SIX6OS1Q8N1H7 587 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 DUSP9Q99956 384 aaKnown RBP11.93□□□□□ -0.5
IFT140-202ENST00000397417 TRIM51Q9BSJ1 452 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 OSGEPQ9NPF4 335 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 PRDM5Q9NQX1 630 aaPredicted RBP11.93□□□□□ -0.5
IFT140-202ENST00000397417 GPRC5DQ9NZD1 345 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 SEL1LQ9UBV2 794 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 DR1Q01658 176 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 SLC35G2Q8TBE7 412 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 RAET1EQ8TD07 263 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 SCFD2Q8WU76 684 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 TCP11Q8WWU5 503 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 CABS1Q96KC9 395 aa11.93□□□□□ -0.5
IFT140-202ENST00000397417 GBA2Q9HCG7 927 aaPredicted RBP11.93□□□□□ -0.5
IFT140-202ENST00000397417 PRG3Q9Y2Y8 225 aaPredicted RBP11.93□□□□□ -0.5
IFT140-202ENST00000397417 UBE4BO95155 1302 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 TBX3O15119 743 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 NPTXRO95502 500 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 H2AFXP16104 143 aaPredicted RBP11.92□□□□□ -0.5
IFT140-202ENST00000397417 YY1P25490 414 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 HHATQ5VTY9 493 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 CCDC121Q6ZUS5 278 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 PNMA8AQ86V59 439 aaPredicted RBP11.92□□□□□ -0.5
IFT140-202ENST00000397417 MICAL1Q8TDZ2 1067 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 SLC20A1Q8WUM9 679 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 BHMTQ93088 406 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 OSMRQ99650 979 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 TMEM117Q9H0C3 514 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 SAMD15Q9P1V8 674 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 NOVA2Q9UNW9 492 aaKnown RBP11.92□□□□□ -0.5
IFT140-202ENST00000397417 A0A087WZ62 844 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 EIF3CLB5ME19 914 aaKnown RBP11.92□□□□□ -0.5
IFT140-202ENST00000397417 PRPSAP2O60256 369 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 GJB6O95452 261 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 BRD2P25440 801 aaKnown RBP11.92□□□□□ -0.5
IFT140-202ENST00000397417 TREML2Q5T2D2 321 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 FRMD5Q7Z6J6 570 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 DNAAF3Q8N9W5 541 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 TMEM35BQ8NCS4 154 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 SPATA4Q8NEY3 305 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 EIF3CQ99613 913 aaKnown RBP11.92□□□□□ -0.5
IFT140-202ENST00000397417 FDXACB1Q9BRP7 624 aaPredicted RBP11.92□□□□□ -0.5
IFT140-202ENST00000397417 A0A1W2PQC6 194 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 ZBBXA8MT70 800 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 PDHXO00330 501 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 TUBBP07437 444 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 ADCYAP1R1P41586 468 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 CCT5P48643 541 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 BEX3Q00994 111 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 TUBB2AQ13885 445 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 RRP1BQ14684 758 aaKnown RBP11.92□□□□□ -0.5
IFT140-202ENST00000397417 OR2W6PQ8NHA6 318 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 GDAP1Q8TB36 358 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 CCDC110Q8TBZ0 833 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 NEK9Q8TD19 979 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 FAM167AQ96KS9 214 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 AGPAT1Q99943 283 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 TUBB2BQ9BVA1 445 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 SLITRK6Q9H5Y7 841 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 TBX20Q9UMR3 447 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 MYO7AQ13402 2215 aa11.92□□□□□ -0.5
IFT140-202ENST00000397417 ECEL1O95672 775 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 OATP04181 439 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 STX2P32856 288 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 NT5C2P49902 561 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 RWDD2BP57060 319 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 ITIH3Q06033 890 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 SLC18A3Q16572 532 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 CC2D1AQ6P1N0 951 aaPredicted RBP11.91□□□□□ -0.5
IFT140-202ENST00000397417 TRIM65Q6PJ69 517 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 CCDC60Q8IWA6 550 aaPredicted RBP11.91□□□□□ -0.5
IFT140-202ENST00000397417 CCDC13Q8IYE1 715 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 WNK4Q96J92 1243 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 THAP2Q9H0W7 228 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 KCND1Q9NSA2 647 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 ARHGAP20Q9P2F6 1191 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 PASKQ96RG2 1323 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 ASB14A6NK59 587 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 RNF225M0QZC1 329 aaPredicted RBP11.91□□□□□ -0.5
IFT140-202ENST00000397417 RAP1GAPP47736 663 aa11.91□□□□□ -0.5
IFT140-202ENST00000397417 NOP14P78316 857 aaKnown RBP11.91□□□□□ -0.5
IFT140-202ENST00000397417 KLHDC7AQ5VTJ3 777 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms