RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PPP1R37O75864 691 aa16.26■□□□□ 0.19
CAPN3-207ENST00000397200 PRPF6O94906 941 aaKnown RBP16.26■□□□□ 0.19
CAPN3-207ENST00000397200 FKBP3Q00688 224 aaKnown RBP16.26■□□□□ 0.19
CAPN3-207ENST00000397200 TLE2Q04725 743 aa16.26■□□□□ 0.19
CAPN3-207ENST00000397200 TRIM71Q2Q1W2 868 aaKnown RBP16.26■□□□□ 0.19
CAPN3-207ENST00000397200 EDRF1Q3B7T1 1238 aa16.26■□□□□ 0.19
CAPN3-207ENST00000397200 CREBRFQ8IUR6 639 aa16.26■□□□□ 0.19
CAPN3-207ENST00000397200 CAGE1Q8TC20 777 aa16.26■□□□□ 0.19
CAPN3-207ENST00000397200 HVCN1Q96D96 273 aa16.26■□□□□ 0.19
CAPN3-207ENST00000397200 OSMRQ99650 979 aa16.26■□□□□ 0.19
CAPN3-207ENST00000397200 STRA6Q9BX79 667 aa16.26■□□□□ 0.19
CAPN3-207ENST00000397200 CELF4Q9BZC1 486 aaKnown RBP16.26■□□□□ 0.19
CAPN3-207ENST00000397200 TMEM134Q9H6X4 195 aa16.26■□□□□ 0.19
CAPN3-207ENST00000397200 IFT122Q9HBG6 1241 aa16.26■□□□□ 0.19
CAPN3-207ENST00000397200 LUC7L2Q9Y383 392 aaKnown RBP16.26■□□□□ 0.19
CAPN3-207ENST00000397200 CDY2AQ9Y6F7 541 aa16.26■□□□□ 0.19
CAPN3-207ENST00000397200 INO80B-WBP1J3KQ70 363 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 SLU7O95391 586 aaKnown RBP16.25■□□□□ 0.19
CAPN3-207ENST00000397200 CTSHP09668 335 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 CRYBB1P53674 252 aaPredicted RBP16.25■□□□□ 0.19
CAPN3-207ENST00000397200 ZBED6P86452 979 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 NCBP1Q09161 790 aaKnown RBP16.25■□□□□ 0.19
CAPN3-207ENST00000397200 STRN3Q13033 797 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 LRRC26Q2I0M4 334 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 FKBP15Q5T1M5 1219 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 WDR59Q6PJI9 974 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 SRGAP1Q7Z6B7 1085 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 MTERF4Q7Z6M4 381 aaKnown RBP16.25■□□□□ 0.19
CAPN3-207ENST00000397200 UBE2Q1Q7Z7E8 422 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 IFNLR1Q8IU57 520 aaPredicted RBP16.25■□□□□ 0.19
CAPN3-207ENST00000397200 NELFCDQ8IXH7 590 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 TSC1Q92574 1164 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 ACCSQ96QU6 501 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 INO80BQ9C086 356 aaPredicted RBP16.25■□□□□ 0.19
CAPN3-207ENST00000397200 NDST4Q9H3R1 872 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 DNAI1Q9UI46 699 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 TBX20Q9UMR3 447 aa16.25■□□□□ 0.19
CAPN3-207ENST00000397200 GNA14O95837 355 aa16.24■□□□□ 0.19
CAPN3-207ENST00000397200 CKBP12277 381 aa16.24■□□□□ 0.19
CAPN3-207ENST00000397200 HNRNPH3P31942 346 aaKnown RBP16.24■□□□□ 0.19
CAPN3-207ENST00000397200 CDK17Q00537 523 aa16.24■□□□□ 0.19
CAPN3-207ENST00000397200 MBTD1Q05BQ5 628 aa16.24■□□□□ 0.19
CAPN3-207ENST00000397200 BFSP2Q13515 415 aa16.24■□□□□ 0.19
CAPN3-207ENST00000397200 MAPK6Q16659 721 aa16.24■□□□□ 0.19
CAPN3-207ENST00000397200 SYCP3Q8IZU3 236 aa16.24■□□□□ 0.19
CAPN3-207ENST00000397200 KCNN1Q92952 543 aa16.24■□□□□ 0.19
CAPN3-207ENST00000397200 EEF2KMTQ96G04 330 aa16.24■□□□□ 0.19
CAPN3-207ENST00000397200 CCDC113Q9H0I3 377 aa16.24■□□□□ 0.19
CAPN3-207ENST00000397200 TMEM206Q9H813 350 aa16.24■□□□□ 0.19
CAPN3-207ENST00000397200 CDHR5Q9HBB8 845 aa16.24■□□□□ 0.19
CAPN3-207ENST00000397200 EXOC7Q9UPT5 735 aa16.24■□□□□ 0.19
CAPN3-207ENST00000397200 PRKCBP05771 671 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 DARSP14868 501 aaKnown RBP16.23■□□□□ 0.19
CAPN3-207ENST00000397200 EIF4BP23588 611 aaKnown RBP16.23■□□□□ 0.19
CAPN3-207ENST00000397200 MGAT3Q09327 533 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 KCNA1Q09470 495 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 FAAP100Q0VG06 881 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 KNOP1Q1ED39 458 aaKnown RBP16.23■□□□□ 0.19
CAPN3-207ENST00000397200 FAM26DQ5JW98 314 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 ZNF618Q5T7W0 954 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 ZNF662Q6ZS27 426 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 TAS1R3Q7RTX0 852 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 MAP4K3Q8IVH8 894 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 MINDY3Q9H8M7 445 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 PRMT7Q9NVM4 692 aaPredicted RBP16.23■□□□□ 0.19
CAPN3-207ENST00000397200 TRAF3IP3Q9Y228 551 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 CCDC85CA6NKD9 419 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 PES1O00541 588 aaKnown RBP16.23■□□□□ 0.19
CAPN3-207ENST00000397200 CSDE1O75534 798 aaKnown RBP16.23■□□□□ 0.19
CAPN3-207ENST00000397200 CHRNA1P02708 482 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 TRIM21P19474 475 aaKnown RBP16.23■□□□□ 0.19
CAPN3-207ENST00000397200 KLK7P49862 253 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 TRIM59Q8IWR1 403 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 TNS4Q8IZW8 715 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 BICD1Q96G01 975 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 WDR24Q96S15 920 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 CHP1Q99653 195 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 EDEM3Q9BZQ6 932 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 FZD8Q9H461 694 aa16.23■□□□□ 0.19
CAPN3-207ENST00000397200 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
CAPN3-207ENST00000397200 ERLIN2O94905 339 aa16.22■□□□□ 0.19
CAPN3-207ENST00000397200 NDUFA10O95299 355 aa16.22■□□□□ 0.19
CAPN3-207ENST00000397200 CLTBP09497 229 aa16.22■□□□□ 0.19
CAPN3-207ENST00000397200 HOXD13P35453 343 aa16.22■□□□□ 0.19
CAPN3-207ENST00000397200 ARHGAP25P42331 645 aa16.22■□□□□ 0.19
CAPN3-207ENST00000397200 GNG11P61952 73 aa16.22■□□□□ 0.19
CAPN3-207ENST00000397200 ACRBPQ8NEB7 543 aa16.22■□□□□ 0.19
CAPN3-207ENST00000397200 TMEM40Q8WWA1 233 aa16.22■□□□□ 0.19
CAPN3-207ENST00000397200 MRPL4Q9BYD3 311 aaKnown RBP16.22■□□□□ 0.19
CAPN3-207ENST00000397200 GBP3Q9H0R5 595 aa16.22■□□□□ 0.19
CAPN3-207ENST00000397200 AGPAT5Q9NUQ2 364 aa16.22■□□□□ 0.19
CAPN3-207ENST00000397200 REXO2Q9Y3B8 237 aaKnown RBP16.22■□□□□ 0.19
CAPN3-207ENST00000397200 ZMYM2Q9UBW7 1377 aa16.22■□□□□ 0.19
CAPN3-207ENST00000397200 ACKR2O00590 384 aa16.21■□□□□ 0.19
CAPN3-207ENST00000397200 HNRNPDLO14979 420 aaKnown RBP16.21■□□□□ 0.19
CAPN3-207ENST00000397200 RRP9O43818 475 aaKnown RBP16.21■□□□□ 0.19
CAPN3-207ENST00000397200 IQCF3P0C7M6 154 aa16.21■□□□□ 0.19
CAPN3-207ENST00000397200 SELPP16109 830 aa16.21■□□□□ 0.19
CAPN3-207ENST00000397200 PRPF4BQ13523 1007 aaKnown RBP16.21■□□□□ 0.19
CAPN3-207ENST00000397200 PCBP1Q15365 356 aaKnown RBP eCLIP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms