RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 ZBTB39O15060 712 aa18.08■□□□□ 0.48
CLTA-203ENST00000396603 TEX28O15482 410 aa18.08■□□□□ 0.48
CLTA-203ENST00000396603 PDGFBP01127 241 aaPredicted RBP18.08■□□□□ 0.48
CLTA-203ENST00000396603 GLRA2P23416 452 aa18.08■□□□□ 0.48
CLTA-203ENST00000396603 GRIK3Q13003 919 aa18.08■□□□□ 0.48
CLTA-203ENST00000396603 TRIM29Q14134 588 aa18.08■□□□□ 0.48
CLTA-203ENST00000396603 ME3Q16798 604 aa18.08■□□□□ 0.48
CLTA-203ENST00000396603 NSUN7Q8NE18 718 aaKnown RBP18.08■□□□□ 0.48
CLTA-203ENST00000396603 ATOH1Q92858 354 aaPredicted RBP18.08■□□□□ 0.48
CLTA-203ENST00000396603 WDR6Q9NNW5 1121 aaKnown RBP18.08■□□□□ 0.48
CLTA-203ENST00000396603 MAN1C1Q9NR34 630 aa18.08■□□□□ 0.48
CLTA-203ENST00000396603 FNIP2Q9P278 1114 aa18.08■□□□□ 0.48
CLTA-203ENST00000396603 DUSP12Q9UNI6 340 aa18.08■□□□□ 0.48
CLTA-203ENST00000396603 LIMCH1Q9UPQ0 1083 aa18.08■□□□□ 0.48
CLTA-203ENST00000396603 PRG3Q9Y2Y8 225 aaPredicted RBP18.08■□□□□ 0.48
CLTA-203ENST00000396603 FAM205CA6NFA0 338 aa18.07■□□□□ 0.48
CLTA-203ENST00000396603 SSBP05455 408 aaKnown RBP eCLIP18.07■□□□□ 0.48
CLTA-203ENST00000396603 ASGR2P07307 311 aa18.07■□□□□ 0.48
CLTA-203ENST00000396603 MCM2P49736 904 aa18.07■□□□□ 0.48
CLTA-203ENST00000396603 SCNN1GP51170 649 aa18.07■□□□□ 0.48
CLTA-203ENST00000396603 FAM187BQ17R55 369 aa18.07■□□□□ 0.48
CLTA-203ENST00000396603 USP41Q3LFD5 358 aa18.07■□□□□ 0.48
CLTA-203ENST00000396603 DIS3L2Q8IYB7 885 aaKnown RBP18.07■□□□□ 0.48
CLTA-203ENST00000396603 ASAP3Q8TDY4 903 aa18.07■□□□□ 0.48
CLTA-203ENST00000396603 ZSCAN31Q96LW9 406 aaPredicted RBP18.07■□□□□ 0.48
CLTA-203ENST00000396603 KIF2CQ99661 725 aa18.07■□□□□ 0.48
CLTA-203ENST00000396603 RNF39Q9H2S5 420 aa18.07■□□□□ 0.48
CLTA-203ENST00000396603 MFSD1Q9H3U5 465 aa18.07■□□□□ 0.48
CLTA-203ENST00000396603 TUFT1Q9NNX1 390 aa18.07■□□□□ 0.48
CLTA-203ENST00000396603 PRMT7Q9NVM4 692 aaPredicted RBP18.07■□□□□ 0.48
CLTA-203ENST00000396603 ZDHHC7Q9NXF8 308 aa18.07■□□□□ 0.48
CLTA-203ENST00000396603 EPS15L1Q9UBC2 864 aa18.07■□□□□ 0.48
CLTA-203ENST00000396603 BTBD18B2RXH4 712 aa18.06■□□□□ 0.48
CLTA-203ENST00000396603 MUTP22033 750 aa18.06■□□□□ 0.48
CLTA-203ENST00000396603 NBL1P41271 181 aa18.06■□□□□ 0.48
CLTA-203ENST00000396603 CDCA2Q69YH5 1023 aaPredicted RBP18.06■□□□□ 0.48
CLTA-203ENST00000396603 KANK3Q6NY19 840 aa18.06■□□□□ 0.48
CLTA-203ENST00000396603 TMEM105Q8N8V8 129 aa18.06■□□□□ 0.48
CLTA-203ENST00000396603 GSTCDQ8NEC7 633 aa18.06■□□□□ 0.48
CLTA-203ENST00000396603 CPB2Q96IY4 423 aa18.06■□□□□ 0.48
CLTA-203ENST00000396603 ZFP42Q96MM3 310 aa18.06■□□□□ 0.48
CLTA-203ENST00000396603 C2orf40Q9H1Z8 148 aa18.06■□□□□ 0.48
CLTA-203ENST00000396603 KCNK12Q9HB15 430 aa18.06■□□□□ 0.48
CLTA-203ENST00000396603 SH2B1Q9NRF2 756 aaPredicted RBP18.06■□□□□ 0.48
CLTA-203ENST00000396603 ADAM28Q9UKQ2 775 aa18.06■□□□□ 0.48
CLTA-203ENST00000396603 CACNA1HO95180 2353 aa18.05■□□□□ 0.48
CLTA-203ENST00000396603 CLUHO75153 1309 aa18.05■□□□□ 0.48
CLTA-203ENST00000396603 C2CD2LO14523 706 aa18.05■□□□□ 0.48
CLTA-203ENST00000396603 GFRA3O60609 400 aa18.05■□□□□ 0.48
CLTA-203ENST00000396603 TXKP42681 527 aa18.05■□□□□ 0.48
CLTA-203ENST00000396603 FUT10Q6P4F1 479 aa18.05■□□□□ 0.48
CLTA-203ENST00000396603 ZBTB8OSQ8IWT0 167 aa18.05■□□□□ 0.48
CLTA-203ENST00000396603 RTP3Q9BQQ7 232 aa18.05■□□□□ 0.48
CLTA-203ENST00000396603 POLR3CQ9BUI4 534 aaPredicted RBP18.05■□□□□ 0.48
CLTA-203ENST00000396603 POLR3FQ9H1D9 316 aaPredicted RBP18.05■□□□□ 0.48
CLTA-203ENST00000396603 FZD8Q9H461 694 aa18.05■□□□□ 0.48
CLTA-203ENST00000396603 NXF3Q9H4D5 531 aaKnown RBP18.05■□□□□ 0.48
CLTA-203ENST00000396603 MIOSQ9NXC5 875 aa18.05■□□□□ 0.48
CLTA-203ENST00000396603 HES2Q9Y543 173 aa18.05■□□□□ 0.48
CLTA-203ENST00000396603 CCDC195A0A1B0GUA6 201 aa18.04■□□□□ 0.48
CLTA-203ENST00000396603 AOC1P19801 751 aa18.04■□□□□ 0.48
CLTA-203ENST00000396603 SAFBQ15424 915 aaKnown RBP eCLIP18.04■□□□□ 0.48
CLTA-203ENST00000396603 TAS1R1Q7RTX1 841 aa18.04■□□□□ 0.48
CLTA-203ENST00000396603 ERMNQ8TAM6 284 aa18.04■□□□□ 0.48
CLTA-203ENST00000396603 NACC1Q96RE7 527 aa18.04■□□□□ 0.48
CLTA-203ENST00000396603 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.04■□□□□ 0.48
CLTA-203ENST00000396603 WNT16Q9UBV4 365 aa18.04■□□□□ 0.48
CLTA-203ENST00000396603 ZFP37Q9Y6Q3 630 aaPredicted RBP18.04■□□□□ 0.48
CLTA-203ENST00000396603 SF3B1O75533 1304 aaKnown RBP eCLIP18.03■□□□□ 0.48
CLTA-203ENST00000396603 H0Y858 1186 aa18.03■□□□□ 0.48
CLTA-203ENST00000396603 N4BP3O15049 544 aa18.03■□□□□ 0.48
CLTA-203ENST00000396603 USO1O60763 962 aaKnown RBP18.03■□□□□ 0.48
CLTA-203ENST00000396603 SPATA31C1P0DKV0 1188 aa18.03■□□□□ 0.48
CLTA-203ENST00000396603 TUSC3Q13454 348 aa18.03■□□□□ 0.48
CLTA-203ENST00000396603 CWF19L1Q69YN2 538 aaKnown RBP18.03■□□□□ 0.48
CLTA-203ENST00000396603 PDXDC1Q6P996 788 aa18.03■□□□□ 0.48
CLTA-203ENST00000396603 LILRA6Q6PI73 481 aa18.03■□□□□ 0.48
CLTA-203ENST00000396603 CATSPER3Q86XQ3 398 aa18.03■□□□□ 0.48
CLTA-203ENST00000396603 NECAB1Q8N987 351 aa18.03■□□□□ 0.48
CLTA-203ENST00000396603 PIGOQ8TEQ8 1089 aa18.03■□□□□ 0.48
CLTA-203ENST00000396603 SMOC2Q9H3U7 446 aa18.03■□□□□ 0.48
CLTA-203ENST00000396603 MYO15AQ9UKN7 3530 aa18.03■□□□□ 0.48
CLTA-203ENST00000396603 POTEMA6NI47 508 aa18.02■□□□□ 0.48
CLTA-203ENST00000396603 LRRIQ4A6NIV6 560 aa18.02■□□□□ 0.48
CLTA-203ENST00000396603 B4GALT5O43286 388 aa18.02■□□□□ 0.48
CLTA-203ENST00000396603 TGM5O43548 720 aa18.02■□□□□ 0.48
CLTA-203ENST00000396603 NPTXRO95502 500 aa18.02■□□□□ 0.48
CLTA-203ENST00000396603 RPA1P27694 616 aa18.02■□□□□ 0.48
CLTA-203ENST00000396603 ELAVL2Q12926 359 aaKnown RBP18.02■□□□□ 0.48
CLTA-203ENST00000396603 HSP90AA2PQ14568 343 aaPredicted RBP18.02■□□□□ 0.48
CLTA-203ENST00000396603 PPP2R5AQ15172 486 aa18.02■□□□□ 0.48
CLTA-203ENST00000396603 SMG7Q92540 1137 aaKnown RBP18.02■□□□□ 0.48
CLTA-203ENST00000396603 ZNF707Q96C28 371 aaPredicted RBP18.02■□□□□ 0.48
CLTA-203ENST00000396603 APOL6Q9BWW8 343 aa18.02■□□□□ 0.48
CLTA-203ENST00000396603 GPR62Q9BZJ7 368 aa18.02■□□□□ 0.48
CLTA-203ENST00000396603 PRKD2Q9BZL6 878 aa18.02■□□□□ 0.48
CLTA-203ENST00000396603 NT5C3AQ9H0P0 336 aa18.02■□□□□ 0.48
CLTA-203ENST00000396603 FAM86C1Q9NVL1 165 aa18.02■□□□□ 0.48
CLTA-203ENST00000396603 N4BP1O75113 896 aaKnown RBP18.01■□□□□ 0.47
CLTA-203ENST00000396603 TADA2AO75478 443 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms