RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 BIRC3Q13489 604 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 MOB2Q70IA6 237 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 IFT20Q8IY31 132 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 SLC35G2Q8TBE7 412 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 TCHPQ9BT92 498 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 GPR88Q9GZN0 384 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 KIAA1217Q5T5P2 1943 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 ADGRA3Q8IWK6 1321 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 MAP2K7O14733 419 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 ATP4AP20648 1035 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 SLC26A2P50443 739 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 FSTL1Q12841 308 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 MXD4Q14582 209 aaPredicted RBP17.41■□□□□ 0.38
SNX6-202ENST00000396526 CASP8Q14790 479 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 FAM71AQ8IYT1 594 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 RPUSD2Q8IZ73 545 aaKnown RBP17.41■□□□□ 0.38
SNX6-202ENST00000396526 SHCBP1Q8NEM2 672 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 PLEKHO2Q8TD55 490 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 MSTO1Q9BUK6 570 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 CTTNBP2NLQ9P2B4 639 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 RBPJLQ9UBG7 517 aa17.41■□□□□ 0.38
SNX6-202ENST00000396526 PEX10O60683 326 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 RTN2O75298 545 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 GPC5P78333 572 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 TTLL4Q14679 1199 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 CCNI2Q6ZMN8 369 aaPredicted RBP17.4■□□□□ 0.38
SNX6-202ENST00000396526 ZSWIM2Q8NEG5 633 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 PSPC1Q8WXF1 523 aaKnown RBP17.4■□□□□ 0.38
SNX6-202ENST00000396526 NAP1L3Q99457 506 aaPredicted RBP17.4■□□□□ 0.38
SNX6-202ENST00000396526 STIM2Q9P246 746 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 MYH9P35579 1960 aaKnown RBP17.4■□□□□ 0.38
SNX6-202ENST00000396526 FTLP02792 175 aaPredicted RBP17.4■□□□□ 0.38
SNX6-202ENST00000396526 PSMD6Q15008 389 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 SLC39A4Q6P5W5 647 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 SHC3Q92529 594 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 PACSIN2Q9UNF0 486 aaPredicted RBP17.4■□□□□ 0.38
SNX6-202ENST00000396526 TELO2Q9Y4R8 837 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 NCANO14594 1321 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 MAFO75444 373 aaPredicted RBP17.4■□□□□ 0.38
SNX6-202ENST00000396526 PIGRP01833 764 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 PGK2P07205 417 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 KRT5P13647 590 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 LRRC57Q8N9N7 239 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 ASAP3Q8TDY4 903 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 TAS1R2Q8TE23 839 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 POP1Q99575 1024 aaKnown RBP17.4■□□□□ 0.38
SNX6-202ENST00000396526 LRRC1Q9BTT6 524 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 IMPG2Q9BZV3 1241 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 SUGCTQ9HAC7 445 aa17.4■□□□□ 0.38
SNX6-202ENST00000396526 UNCXA6NJT0 531 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 PGRMC1O00264 195 aaKnown RBP17.39■□□□□ 0.37
SNX6-202ENST00000396526 PHACTR2O75167 634 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 POTEJP0CG39 1038 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 GCNT1Q02742 428 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 LY6KQ17RY6 165 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 CELF3Q5SZQ8 465 aaKnown RBP17.39■□□□□ 0.37
SNX6-202ENST00000396526 MS4A14Q96JA4 679 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 SPATA33Q96N06 139 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 C2orf40Q9H1Z8 148 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 SMARCAD1Q9H4L7 1026 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 VIPAS39Q9H9C1 493 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 ZC3H4Q9UPT8 1303 aaKnown RBP17.39■□□□□ 0.37
SNX6-202ENST00000396526 CYP26A1O43174 497 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 ADCY3O60266 1144 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 SASH3O75995 380 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 TFDP1Q14186 410 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 PLPPR4Q7Z2D5 763 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 SLFN11Q7Z7L1 901 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 SYT11Q9BT88 431 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 RBAKQ9NYW8 714 aaPredicted RBP17.39■□□□□ 0.37
SNX6-202ENST00000396526 ANKFY1Q9P2R3 1169 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 STYXL1Q9Y6J8 313 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 GLTPD2A6NH11 291 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 CLDN3O15551 220 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 CNMDO75829 334 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 YBX3P16989 372 aaKnown RBP eCLIP17.39■□□□□ 0.375e-10■■□□□ 13
SNX6-202ENST00000396526 ERVK-9P63128 1117 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 TARBP2Q15633 366 aaKnown RBP17.39■□□□□ 0.37
SNX6-202ENST00000396526 ZPBP2Q6X784 338 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 SCFD2Q8WU76 684 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 CCDC102AQ96A19 550 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 MRPL4Q9BYD3 311 aaKnown RBP17.39■□□□□ 0.37
SNX6-202ENST00000396526 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.39■□□□□ 0.372e-9■■■■■ 223.6
SNX6-202ENST00000396526 RBM12Q9NTZ6 932 aaKnown RBP17.39■□□□□ 0.37
SNX6-202ENST00000396526 IVNS1ABPQ9Y6Y0 642 aa17.39■□□□□ 0.37
SNX6-202ENST00000396526 CCDC188H7C350 402 aa17.38■□□□□ 0.37
SNX6-202ENST00000396526 AP3M2P53677 418 aa17.38■□□□□ 0.37
SNX6-202ENST00000396526 USP38Q8NB14 1042 aa17.38■□□□□ 0.37
SNX6-202ENST00000396526 ACTRT1Q8TDG2 376 aa17.38■□□□□ 0.37
SNX6-202ENST00000396526 ZNF526Q8TF50 670 aaPredicted RBP17.38■□□□□ 0.37
SNX6-202ENST00000396526 ATP8B4Q8TF62 1192 aa17.38■□□□□ 0.37
SNX6-202ENST00000396526 TARS2Q9BW92 718 aaKnown RBP17.38■□□□□ 0.37
SNX6-202ENST00000396526 SBF1O95248 1867 aa17.38■□□□□ 0.37
SNX6-202ENST00000396526 TXNP10599 105 aaKnown RBP17.38■□□□□ 0.37
SNX6-202ENST00000396526 PIK3CAP42336 1068 aa17.38■□□□□ 0.37
SNX6-202ENST00000396526 PRPF4BQ13523 1007 aaKnown RBP17.38■□□□□ 0.37
SNX6-202ENST00000396526 PPP2R5EQ16537 467 aa17.38■□□□□ 0.37
SNX6-202ENST00000396526 GPR162Q16538 588 aa17.38■□□□□ 0.37
SNX6-202ENST00000396526 TMEM132AQ24JP5 1023 aa17.38■□□□□ 0.37
SNX6-202ENST00000396526 TAF3Q5VWG9 929 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms