RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ZMYND8Q9ULU4 1186 aaPredicted RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 LRCH1Q9Y2L9 728 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 SNX24Q9Y343 169 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 COL5A3P25940 1745 aaPredicted RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 TNKSO95271 1327 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 BICDL2A1A5D9 508 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 GYG1P46976 350 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 SOX10P56693 466 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 THOC5Q13769 683 aaKnown RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 TRIM14Q14142 442 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 ZNF174Q15697 407 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 PRR16Q569H4 304 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 PEX26Q7Z412 305 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 FANCBQ8NB91 859 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 FMO2Q99518 471 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 RIOK1Q9BRS2 568 aaKnown RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 FOXP1Q9H334 677 aaPredicted RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 TBC1D23Q9NUY8 699 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 TUBA8Q9NY65 449 aaPredicted RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 SEL1LQ9UBV2 794 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 ANGPTL2Q9UKU9 493 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 RGPD3A6NKT7 1758 aaPredicted RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 RGPD4Q7Z3J3 1758 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 MAPK13O15264 365 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 TRAPPC3O43617 180 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 HSD17B3P37058 310 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 SERPINB8P50452 374 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 PLCD1P51178 756 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 TBX2Q13207 712 aaPredicted RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 DCTN2Q13561 401 aaKnown RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 NPY5RQ15761 445 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 TMEM259Q4ZIN3 620 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 RABGAP1LQ5R372 815 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 C1orf146Q5VVC0 180 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 TLDC1Q6P9B6 456 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 IFNLR1Q8IU57 520 aaPredicted RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 SRRM1Q8IYB3 904 aaKnown RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 ENAHQ8N8S7 591 aaPredicted RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 SPIRE2Q8WWL2 714 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 HSPBAP1Q96EW2 488 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 EYA3Q99504 573 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 LACRTQ9GZZ8 138 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 CSRNP2Q9H175 543 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 VPS54Q9P1Q0 977 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 ASIC3Q9UHC3 531 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 AMACRQ9UHK6 382 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 ZNRF3Q9ULT6 936 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 ZNF804BA4D1E1 1349 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 PASKQ96RG2 1323 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 GOLGA8IPA6NC78 632 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 PLEKHA8P1O95397 391 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 PLCG2P16885 1265 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 ATP6V1C1P21283 382 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 CYP7A1P22680 504 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 PMS2P54278 862 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 PARP10Q53GL7 1025 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 TJAP1Q5JTD0 557 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 C6orf118Q5T5N4 469 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 LLGL2Q6P1M3 1020 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 APTXQ7Z2E3 356 aaKnown RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 PEX5LQ8IYB4 626 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 CCDC105Q8IYK2 499 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 SLC7A5P1Q8MH63 180 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 RBBP8NLQ8NC74 664 aaPredicted RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 SPATA20Q8TB22 786 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 ENOX1Q8TC92 643 aaKnown RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 SLC26A7Q8TE54 656 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 EPSTI1Q96J88 318 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 CRNKL1Q9BZJ0 848 aaKnown RBP8.98□□□□□ -0.97
NDE1-202ENST00000396355 NT5C3AQ9H0P0 336 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 OCEL1Q9H607 264 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 CYLDQ9NQC7 956 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 ARL2BPQ9Y2Y0 163 aa8.98□□□□□ -0.97
NDE1-202ENST00000396355 ARHGAP10A1A4S6 786 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 POC1B-GALNT4F8VUJ3 575 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 AP3B1O00203 1094 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 TBCAO75347 108 aaKnown RBP8.97□□□□□ -0.97
NDE1-202ENST00000396355 DEXIO95424 95 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 KRT18P05783 430 aaKnown RBP8.97□□□□□ -0.97
NDE1-202ENST00000396355 GJC1P36383 396 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 DYNLL1P63167 89 aaKnown RBP8.97□□□□□ -0.97
NDE1-202ENST00000396355 CARTPTQ16568 116 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 IRGCQ6NXR0 463 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 IQCF2Q8IXL9 164 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 STKLD1Q8NE28 680 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 NEK9Q8TD19 979 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 STK32AQ8WU08 396 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 ZMYND12Q9H0C1 365 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 RNPEPL1Q9HAU8 725 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 PARVBQ9HBI1 364 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 ADAM22Q9P0K1 906 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 LAMB1P07942 1786 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 MYCP01106 439 aaPredicted RBP8.97□□□□□ -0.97
NDE1-202ENST00000396355 CD44P16070 742 aaKnown RBP8.97□□□□□ -0.97
NDE1-202ENST00000396355 KLRK1P26718 216 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 HOXD12P35452 270 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 EIF4A3P38919 411 aaKnown RBP8.97□□□□□ -0.97
NDE1-202ENST00000396355 UBA7P41226 1012 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 GNAQP50148 359 aa8.97□□□□□ -0.97
NDE1-202ENST00000396355 ERVK-24P63145 666 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms