RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 KCNA1Q09470 495 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 PSMD2Q13200 908 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 BTG3Q14201 252 aaPredicted RBP21.03■□□□□ 0.96
HOXA9-202ENST00000396345 PAN2Q504Q3 1202 aaKnown RBP21.03■□□□□ 0.96
HOXA9-202ENST00000396345 CLLU1OSQ5K130 101 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 AGMOQ6ZNB7 445 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 CMTR2Q8IYT2 770 aaKnown RBP21.03■□□□□ 0.96
HOXA9-202ENST00000396345 ABI1Q8IZP0 508 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 HELQQ8TDG4 1101 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 APOL6Q9BWW8 343 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 TMEM117Q9H0C3 514 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 CDT1Q9H211 546 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 RNF39Q9H2S5 420 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 SLC28A3Q9HAS3 691 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 UBN1Q9NPG3 1134 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 ANKFY1Q9P2R3 1169 aa21.03■□□□□ 0.96
HOXA9-202ENST00000396345 FNDC1Q4ZHG4 1894 aaPredicted RBP21.03■□□□□ 0.96
HOXA9-202ENST00000396345 ABLIM1O14639 778 aa21.02■□□□□ 0.96
HOXA9-202ENST00000396345 EIF3DO15371 548 aaKnown RBP eCLIP21.02■□□□□ 0.96
HOXA9-202ENST00000396345 CLDN3O15551 220 aa21.02■□□□□ 0.96
HOXA9-202ENST00000396345 SMC2O95347 1197 aa21.02■□□□□ 0.96
HOXA9-202ENST00000396345 MCF2P10911 925 aa21.02■□□□□ 0.96
HOXA9-202ENST00000396345 PPP2R2DQ66LE6 453 aa21.02■□□□□ 0.96
HOXA9-202ENST00000396345 GLB1LQ6UWU2 654 aa21.02■□□□□ 0.96
HOXA9-202ENST00000396345 SYCP3Q8IZU3 236 aa21.02■□□□□ 0.96
HOXA9-202ENST00000396345 FIBCD1Q8N539 461 aa21.02■□□□□ 0.96
HOXA9-202ENST00000396345 CASD1Q96PB1 797 aa21.02■□□□□ 0.96
HOXA9-202ENST00000396345 RSAD1Q9HA92 442 aa21.02■□□□□ 0.96
HOXA9-202ENST00000396345 COL4A6Q14031 1691 aa21.02■□□□□ 0.95
HOXA9-202ENST00000396345 LINC01553A4QN01 128 aa21.01■□□□□ 0.95
HOXA9-202ENST00000396345 OFD1O75665 1012 aa21.01■□□□□ 0.95
HOXA9-202ENST00000396345 RHOBTB3O94955 611 aa21.01■□□□□ 0.95
HOXA9-202ENST00000396345 HARSP12081 509 aaKnown RBP21.01■□□□□ 0.95
HOXA9-202ENST00000396345 AKAP5P24588 427 aa21.01■□□□□ 0.95
HOXA9-202ENST00000396345 MCL1Q07820 350 aa21.01■□□□□ 0.95
HOXA9-202ENST00000396345 STK4Q13043 487 aa21.01■□□□□ 0.95
HOXA9-202ENST00000396345 KCNB1Q14721 858 aa21.01■□□□□ 0.95
HOXA9-202ENST00000396345 NOLC1Q14978 699 aaKnown RBP eCLIP21.01■□□□□ 0.95
HOXA9-202ENST00000396345 SLC39A4Q6P5W5 647 aa21.01■□□□□ 0.95
HOXA9-202ENST00000396345 EPM2AIP1Q7L775 607 aaPredicted RBP21.01■□□□□ 0.95
HOXA9-202ENST00000396345 ZNF507Q8TCN5 953 aa21.01■□□□□ 0.95
HOXA9-202ENST00000396345 TMEM206Q9H813 350 aa21.01■□□□□ 0.95
HOXA9-202ENST00000396345 SNTG2Q9NY99 539 aa21.01■□□□□ 0.95
HOXA9-202ENST00000396345 PARP2Q9UGN5 583 aa21.01■□□□□ 0.95
HOXA9-202ENST00000396345 GIT1Q9Y2X7 761 aa21.01■□□□□ 0.95
HOXA9-202ENST00000396345 ANKRD63C9JTQ0 380 aa21■□□□□ 0.95
HOXA9-202ENST00000396345 ARHGEF15O94989 841 aa21■□□□□ 0.95
HOXA9-202ENST00000396345 RSPH1Q8WYR4 309 aa21■□□□□ 0.95
HOXA9-202ENST00000396345 ERCC4Q92889 916 aaPredicted RBP21■□□□□ 0.95
HOXA9-202ENST00000396345 SMARCE1Q969G3 411 aa21■□□□□ 0.95
HOXA9-202ENST00000396345 HAPLN2Q9GZV7 340 aa21■□□□□ 0.95
HOXA9-202ENST00000396345 IKZF4Q9H2S9 585 aa21■□□□□ 0.95
HOXA9-202ENST00000396345 RMND1Q9NWS8 449 aa21■□□□□ 0.95
HOXA9-202ENST00000396345 INPP5FQ9Y2H2 1132 aa21■□□□□ 0.95
HOXA9-202ENST00000396345 GDAQ9Y2T3 454 aa21■□□□□ 0.95
HOXA9-202ENST00000396345 UBE4BO95155 1302 aa21■□□□□ 0.95
HOXA9-202ENST00000396345 TMEM265A0A087WTH1 108 aa20.99■□□□□ 0.95
HOXA9-202ENST00000396345 GRM5P41594 1212 aa20.99■□□□□ 0.95
HOXA9-202ENST00000396345 TAP1Q03518 808 aa20.99■□□□□ 0.95
HOXA9-202ENST00000396345 NOMO2Q5JPE7 1267 aa20.99■□□□□ 0.95
HOXA9-202ENST00000396345 SLFN12LQ6IEE8 588 aa20.99■□□□□ 0.95
HOXA9-202ENST00000396345 GPR153Q6NV75 609 aa20.99■□□□□ 0.95
HOXA9-202ENST00000396345 THNSL1Q8IYQ7 743 aa20.99■□□□□ 0.95
HOXA9-202ENST00000396345 KIAA0895Q8NCT3 520 aa20.99■□□□□ 0.95
HOXA9-202ENST00000396345 URGCPQ8TCY9 931 aa20.99■□□□□ 0.95
HOXA9-202ENST00000396345 SCFD1Q8WVM8 642 aa20.99■□□□□ 0.95
HOXA9-202ENST00000396345 GSDMAQ96QA5 445 aa20.99■□□□□ 0.95
HOXA9-202ENST00000396345 CCDC94Q9BW85 323 aaPredicted RBP20.99■□□□□ 0.95
HOXA9-202ENST00000396345 PCDHA5Q9Y5H7 936 aa20.99■□□□□ 0.95
HOXA9-202ENST00000396345 MRPL42Q9Y6G3 142 aaKnown RBP20.99■□□□□ 0.95
HOXA9-202ENST00000396345 A0A0B4J269 797 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 ARL5CA6NH57 179 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 TISP43B9A030 160 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 RECQL4O94761 1208 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 HOXD13P35453 343 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 MLH1P40692 756 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 OSTNP61366 133 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 BMT2Q1RMZ1 405 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 ZNF697Q5TEC3 545 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 LRRC43Q8N309 656 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 CEP120Q8N960 986 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 GAD1Q99259 594 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 MSTO1Q9BUK6 570 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 MRPL9Q9BYD2 267 aaKnown RBP20.98■□□□□ 0.95
HOXA9-202ENST00000396345 ZNF576Q9H609 170 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 TYW1Q9NV66 732 aaKnown RBP20.98■□□□□ 0.95
HOXA9-202ENST00000396345 KLK14Q9P0G3 267 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 STYXL1Q9Y6J8 313 aa20.98■□□□□ 0.95
HOXA9-202ENST00000396345 YARSP54577 528 aaKnown RBP20.97■□□□□ 0.95
HOXA9-202ENST00000396345 CAMK4Q16566 473 aa20.97■□□□□ 0.95
HOXA9-202ENST00000396345 LRRC55Q6ZSA7 311 aa20.97■□□□□ 0.95
HOXA9-202ENST00000396345 NELFCDQ8IXH7 590 aa20.97■□□□□ 0.95
HOXA9-202ENST00000396345 TMEM192Q8IY95 271 aa20.97■□□□□ 0.95
HOXA9-202ENST00000396345 SPATA20Q8TB22 786 aa20.97■□□□□ 0.95
HOXA9-202ENST00000396345 POMGNT1Q8WZA1 660 aa20.97■□□□□ 0.95
HOXA9-202ENST00000396345 ACAP3Q96P50 834 aa20.97■□□□□ 0.95
HOXA9-202ENST00000396345 TGS1Q96RS0 853 aaKnown RBP20.97■□□□□ 0.95
HOXA9-202ENST00000396345 GBP3Q9H0R5 595 aa20.97■□□□□ 0.95
HOXA9-202ENST00000396345 KANSL3Q9P2N6 904 aa20.97■□□□□ 0.95
HOXA9-202ENST00000396345 CHD9Q3L8U1 2897 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms