RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 LIG1P18858 919 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 GLRA2P23416 452 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 GBP2P32456 591 aaPredicted RBP18.11■□□□□ 0.49
DDR1-229ENST00000396342 GUCY1B3Q02153 619 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 PRPF4BQ13523 1007 aaKnown RBP18.11■□□□□ 0.49
DDR1-229ENST00000396342 PDXDC1Q6P996 788 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 ASAP3Q8TDY4 903 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 HDAC7Q8WUI4 952 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 BCL7CQ8WUZ0 217 aaPredicted RBP18.11■□□□□ 0.49
DDR1-229ENST00000396342 ATOH1Q92858 354 aaPredicted RBP18.11■□□□□ 0.49
DDR1-229ENST00000396342 MTMR9Q96QG7 549 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 POLR3CQ9BUI4 534 aaPredicted RBP18.11■□□□□ 0.49
DDR1-229ENST00000396342 FOXP1Q9H334 677 aaPredicted RBP18.11■□□□□ 0.49
DDR1-229ENST00000396342 PLEKHA4Q9H4M7 779 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 MAN1C1Q9NR34 630 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 HES2Q9Y543 173 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 PLXNA4Q9HCM2 1894 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 ZMYM2Q9UBW7 1377 aa18.1■□□□□ 0.49
DDR1-229ENST00000396342 SF3B1O75533 1304 aaKnown RBP eCLIP18.1■□□□□ 0.498e-6■■■■■ 107
DDR1-229ENST00000396342 A0A1B0GUA9 196 aa18.1■□□□□ 0.49
DDR1-229ENST00000396342 MUTP22033 750 aa18.1■□□□□ 0.49
DDR1-229ENST00000396342 EFNA5P52803 228 aa18.1■□□□□ 0.49
DDR1-229ENST00000396342 ELAVL2Q12926 359 aaKnown RBP18.1■□□□□ 0.49
DDR1-229ENST00000396342 CCDC83Q8IWF9 413 aa18.1■□□□□ 0.49
DDR1-229ENST00000396342 NXF3Q9H4D5 531 aaKnown RBP18.1■□□□□ 0.49
DDR1-229ENST00000396342 SH2B1Q9NRF2 756 aaPredicted RBP18.1■□□□□ 0.49
DDR1-229ENST00000396342 CCDC195A0A1B0GUA6 201 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 STK25O00506 426 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 INPPL1O15357 1258 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 C1RP00736 705 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 AKAP5P24588 427 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 CCT6AP40227 531 aaKnown RBP18.09■□□□□ 0.49
DDR1-229ENST00000396342 TRAPPC10P48553 1259 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 DSG1Q02413 1049 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 TDGQ13569 410 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 ZNF174Q15697 407 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 TTC38Q5R3I4 469 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 PADI6Q6TGC4 694 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 CATSPER3Q86XQ3 398 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 GPR65Q8IYL9 337 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 CMASQ8NFW8 434 aaPredicted RBP18.09■□□□□ 0.49
DDR1-229ENST00000396342 KIFAP3Q92845 792 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 ASIC4Q96FT7 647 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 ZFP42Q96MM3 310 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 RNF39Q9H2S5 420 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 IGSF9Q9P2J2 1179 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 ADAM28Q9UKQ2 775 aa18.09■□□□□ 0.49
DDR1-229ENST00000396342 PHLPP2Q6ZVD8 1323 aa18.08■□□□□ 0.49
DDR1-229ENST00000396342 TEX28O15482 410 aa18.08■□□□□ 0.48
DDR1-229ENST00000396342 LARGE1O95461 756 aa18.08■□□□□ 0.48
DDR1-229ENST00000396342 THP07101 528 aa18.08■□□□□ 0.48
DDR1-229ENST00000396342 ASGR2P07307 311 aa18.08■□□□□ 0.48
DDR1-229ENST00000396342 RPA1P27694 616 aa18.08■□□□□ 0.48
DDR1-229ENST00000396342 NAMPTP43490 491 aa18.08■□□□□ 0.48
DDR1-229ENST00000396342 DSC1Q08554 894 aa18.08■□□□□ 0.48
DDR1-229ENST00000396342 HSP90AA2PQ14568 343 aaPredicted RBP18.08■□□□□ 0.48
DDR1-229ENST00000396342 LIN9Q5TKA1 542 aa18.08■□□□□ 0.48
DDR1-229ENST00000396342 FUT10Q6P4F1 479 aa18.08■□□□□ 0.48
DDR1-229ENST00000396342 PPP4R3CPQ6ZMV5 832 aa18.08■□□□□ 0.48
DDR1-229ENST00000396342 RIN2Q8WYP3 895 aaPredicted RBP18.08■□□□□ 0.48
DDR1-229ENST00000396342 SMG7Q92540 1137 aaKnown RBP18.08■□□□□ 0.48
DDR1-229ENST00000396342 KLK14Q9P0G3 267 aa18.08■□□□□ 0.48
DDR1-229ENST00000396342 LRWD1Q9UFC0 647 aa18.08■□□□□ 0.48
DDR1-229ENST00000396342 CDH22Q9UJ99 828 aa18.08■□□□□ 0.48
DDR1-229ENST00000396342 B4GALT5O43286 388 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 BRD1O95696 1058 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 PRKCBP05771 671 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 CYP11B2P19099 503 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 AFF1P51825 1210 aaKnown RBP18.07■□□□□ 0.48
DDR1-229ENST00000396342 YARSP54577 528 aaKnown RBP18.07■□□□□ 0.48
DDR1-229ENST00000396342 TUSC3Q13454 348 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 DCAF4L1Q3SXM0 396 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 CEP57Q86XR8 500 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 PALB2Q86YC2 1186 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 NOSTRINQ8IVI9 506 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 PRSS33Q8NF86 280 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 FLCNQ8NFG4 579 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 NXPE3Q969Y0 559 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 VN1R3Q9BXE9 311 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 RXFP1Q9HBX9 757 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 GPRC5CQ9NQ84 441 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 ZDHHC7Q9NXF8 308 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.07■□□□□ 0.489e-7■■■■□ 21.1
DDR1-229ENST00000396342 FNIP2Q9P278 1114 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 KCNG1Q9UIX4 513 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 PIEZO1Q92508 2521 aa18.07■□□□□ 0.48
DDR1-229ENST00000396342 TRAPPC3O43617 180 aa18.06■□□□□ 0.48
DDR1-229ENST00000396342 CENPBP07199 599 aaPredicted RBP18.06■□□□□ 0.48
DDR1-229ENST00000396342 AMHR2Q16671 573 aa18.06■□□□□ 0.48
DDR1-229ENST00000396342 FAM187BQ17R55 369 aa18.06■□□□□ 0.48
DDR1-229ENST00000396342 IER5LQ5T953 404 aa18.06■□□□□ 0.48
DDR1-229ENST00000396342 KIAA0319Q5VV43 1072 aa18.06■□□□□ 0.48
DDR1-229ENST00000396342 KRT79Q5XKE5 535 aa18.06■□□□□ 0.48
DDR1-229ENST00000396342 ASTLQ6HA08 431 aaPredicted RBP18.06■□□□□ 0.48
DDR1-229ENST00000396342 KANK3Q6NY19 840 aa18.06■□□□□ 0.48
DDR1-229ENST00000396342 POTEGQ6S5H5 508 aa18.06■□□□□ 0.48
DDR1-229ENST00000396342 CDR2LQ86X02 465 aaPredicted RBP18.06■□□□□ 0.48
DDR1-229ENST00000396342 TMEM60Q9H2L4 133 aa18.06■□□□□ 0.48
DDR1-229ENST00000396342 UPF2Q9HAU5 1272 aaKnown RBP18.06■□□□□ 0.48
DDR1-229ENST00000396342 MARCH5Q9NX47 278 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms