RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 EML1O00423 815 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 NEBLO76041 1014 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 CYP2J2P51589 502 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 STRN3Q13033 797 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 PPP2R5CQ13362 524 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 ALCAMQ13740 583 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 MESDQ14696 234 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 MTFR1Q15390 333 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 LONRF1Q17RB8 773 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 CRY2Q49AN0 593 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 CCDC38Q502W7 563 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 EPC2Q52LR7 807 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 ZC2HC1CQ53FD0 456 aaPredicted RBP9.32□□□□□ -0.92
BDNF-204ENST00000395980 SLFN13Q68D06 897 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 FBXO11Q86XK2 927 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 C12orf56Q8IXR9 622 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 RPUSD2Q8IZ73 545 aaKnown RBP9.32□□□□□ -0.92
BDNF-204ENST00000395980 GRK7Q8WTQ7 553 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 SNF8Q96H20 258 aa9.32□□□□□ -0.92
BDNF-204ENST00000395980 PIK3CDO00329 1044 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 MAPK13O15264 365 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 SPOPO43791 374 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 SORBS3O60504 671 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 DIAPH2O60879 1101 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 LRRN2O75325 713 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 ATP2A2P16615 1042 aaKnown RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 GRIK3Q13003 919 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 CMPK2Q5EBM0 449 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 CEP128Q6ZU80 1094 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 SLC51AQ86UW1 340 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 RELL1Q8IUW5 271 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 RIBC1Q8N443 379 aaPredicted RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 ZNF564Q8TBZ8 553 aaPredicted RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 CORO1CQ9ULV4 474 aaPredicted RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 LRRC37AA6NMS7 1700 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 LTBP1Q14766 1721 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 TMEM110-MUSTN1A8MSY1 372 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 MPHOSPH10O00566 681 aaKnown RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 TP73O15350 636 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 EXOC3O60645 756 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 UNC5CO95185 931 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 ICA1Q05084 483 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 COG2Q14746 738 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 CCDC25Q86WR0 208 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 FITM2Q8N6M3 262 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 PSPC1Q8WXF1 523 aaKnown RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 TGS1Q96RS0 853 aaKnown RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 DDX23Q9BUQ8 820 aaKnown RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 BCAS3Q9H6U6 928 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 UBE2TQ9NPD8 197 aaPredicted RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 NKIRAS1Q9NYS0 192 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 RGL1Q9NZL6 768 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 ADAM22Q9P0K1 906 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 NOCTQ9UK39 431 aaKnown RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 RBBP6Q7Z6E9 1792 aaKnown RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 IGLV3-22A0A075B6J6 115 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 CDH16O75309 829 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 SMNDC1O75940 238 aaKnown RBP eCLIP9.31□□□□□ -0.92
BDNF-204ENST00000395980 BRAFP15056 766 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 MCCD1P59942 119 aaPredicted RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 KRT17Q04695 432 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 BLMHQ13867 455 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 LRRC14Q15048 493 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 PAXIP1Q6ZW49 1069 aaPredicted RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 BBOF1Q8ND07 529 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 EPS8L1Q8TE68 723 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 ARHGEF1Q92888 912 aaKnown RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 NACC1Q96RE7 527 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 FOXP3Q9BZS1 431 aa9.31□□□□□ -0.92
BDNF-204ENST00000395980 RPL26L1Q9UNX3 145 aaKnown RBP9.31□□□□□ -0.92
BDNF-204ENST00000395980 TCRBV7S2A1N4TA0A589 114 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 SFI1A8K8P3 1242 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 BBOX1O75936 387 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 SLITRK3O94933 977 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 MAPTP10636 758 aaKnown RBP9.3□□□□□ -0.92
BDNF-204ENST00000395980 POLD1P28340 1107 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 STX2P32856 288 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 SPDYAQ5MJ70 313 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 CDCA2Q69YH5 1023 aaPredicted RBP9.3□□□□□ -0.92
BDNF-204ENST00000395980 SMIM5Q71RC9 77 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 OTOP1Q7RTM1 612 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 FAM71AQ8IYT1 594 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 TEX9Q8N6V9 391 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 CFAP61Q8NHU2 1237 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 MGARPQ8TDB4 240 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 LRMDAQ9H2I8 198 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 MAGEB2O15479 319 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 PSMD10O75832 226 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 ACSL3O95573 720 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 GAS8O95995 478 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 CHRNB2P17787 502 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 IVDP26440 423 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 ZNF76P36508 570 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 TRAF1Q13077 416 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 NR1H3Q13133 447 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 STAT4Q14765 748 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 SGO2Q562F6 1265 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 LRCH2Q5VUJ6 765 aa9.3□□□□□ -0.92
BDNF-204ENST00000395980 AGGF1Q8N302 714 aaeCLIP9.3□□□□□ -0.92
BDNF-204ENST00000395980 SLC5A5Q92911 643 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms