RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 CKAP2Q8WWK9 683 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 SEC14L1Q92503 715 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 ANKRD36BP1Q96IX9 119 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 GPR101Q96P66 508 aaPredicted RBP10.33□□□□□ -0.76
CDRT1-204ENST00000395906 LRRC37BQ96QE4 947 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 HOXC10Q9NYD6 342 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 SALL4Q9UJQ4 1053 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 PCDHB2Q9Y5E7 798 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 ZNF609O15014 1411 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 ERVV-1B6SEH8 477 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 MAPK13O15264 365 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 MTRF1O75570 445 aaKnown RBP10.33□□□□□ -0.76
CDRT1-204ENST00000395906 T-ENOLP0DO92 83 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 HNRNPH3P31942 346 aaKnown RBP10.33□□□□□ -0.76
CDRT1-204ENST00000395906 COG7P83436 770 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 PLCB3Q01970 1234 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 CTDSPL2Q05D32 466 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 ARHGEF6Q15052 776 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 MTFR1Q15390 333 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 NDUFA5Q16718 116 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 CTC1Q2NKJ3 1217 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 ERFEQ4G0M1 354 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 ACSBG2Q5FVE4 666 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 RFWD3Q6PCD5 774 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 IZUMO2Q6UXV1 221 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 CHST3Q7LGC8 479 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 ATG9AQ7Z3C6 839 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 SFR1Q86XK3 245 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 ARHGAP24Q8N264 748 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 COX4I2Q96KJ9 171 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 TMEM109Q9BVC6 243 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 MTUS1Q9ULD2 1270 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 PPP1R9AQ9ULJ8 1098 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 HPS5Q9UPZ3 1129 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 STXBP5LQ9Y2K9 1186 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 NUP188Q5SRE5 1749 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 SBF2Q86WG5 1849 aa10.33□□□□□ -0.76
CDRT1-204ENST00000395906 PNPLA7Q6ZV29 1317 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 TRIM64CA6NLI5 447 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 DDX3XO00571 662 aaKnown RBP eCLIP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 NDC80O14777 642 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 RPS6KA4O75676 772 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 DCTN3O75935 186 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 MSL3P1P0C860 447 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 RNASE9P60153 205 aaKnown RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 TRIM28Q13263 835 aaKnown RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 TRIM29Q14134 588 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 PARP10Q53GL7 1025 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 TNFAIP8L3Q5GJ75 292 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 FIGNQ5HY92 759 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 TRAPPC3LQ5T215 181 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 MEI1Q5TIA1 1274 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 IL23RQ5VWK5 629 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 SNRNP48Q6IEG0 339 aaKnown RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 CCSAPQ6IQ19 270 aaPredicted RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 CGB2Q6NT52 195 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 BTNL9Q6UXG8 535 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 PIP4K2CQ8TBX8 421 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 GIPC3Q8TF64 312 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 ARHGEF2Q92974 986 aaKnown RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 CEP295NLQ96MC4 621 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 PRICKLE1Q96MT3 831 aaPredicted RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 ZMYND12Q9H0C1 365 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 PABPC3Q9H361 631 aaKnown RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 CUEDC2Q9H467 287 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 PSTPIP2Q9H939 334 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 PLGRKTQ9HBL7 147 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 SRPRBQ9Y5M8 271 aaKnown RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 KLF18A0A0U1RQI7 1052 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 FAM47E-STBD1D6RA91 191 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 BUB1O43683 1085 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 ZBED4O75132 1171 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 FGFR1OPO95684 399 aaKnown RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 EIF2S1P05198 315 aaKnown RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 PLEKP08567 350 aaPredicted RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 SCG2P13521 617 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 POLR2EP19388 210 aaKnown RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 CRABP2P29373 138 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 EIF4A3P38919 411 aaKnown RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 KCNMA1Q12791 1236 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 IFIT5Q13325 482 aaKnown RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 LRRC14Q15048 493 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 TYW1BQ6NUM6 668 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 DSTYKQ6XUX3 929 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 IRF2BP1Q8IU81 584 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 CCDC127Q96BQ5 260 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 MAELQ96JY0 434 aaKnown RBP10.32□□□□□ -0.76
CDRT1-204ENST00000395906 FMO2Q99518 471 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 DBNDD2Q9BQY9 259 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 EPB41L4BQ9H329 900 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 COPRSQ9NQ92 184 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 VPS54Q9P1Q0 977 aa10.32□□□□□ -0.76
CDRT1-204ENST00000395906 ARHGAP10A1A4S6 786 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 FUOMA2VDF0 154 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 TBKBP1A7MCY6 615 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 PALMO75781 387 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 PTPN2P17706 415 aa10.31□□□□□ -0.76
CDRT1-204ENST00000395906 RPL5P46777 297 aaKnown RBP10.31□□□□□ -0.76
CDRT1-204ENST00000395906 DNA2P51530 1060 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms