RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 NSUN2Q08J23 767 aaKnown RBP eCLIP18.4■□□□□ 0.54
UBFD1-201ENST00000395878 STAT4Q14765 748 aa18.4■□□□□ 0.54
UBFD1-201ENST00000395878 SLC18A3Q16572 532 aa18.4■□□□□ 0.54
UBFD1-201ENST00000395878 NUDCD3Q8IVD9 361 aa18.4■□□□□ 0.54
UBFD1-201ENST00000395878 IGDCC4Q8TDY8 1250 aa18.4■□□□□ 0.54
UBFD1-201ENST00000395878 C1orf54Q8WWF1 131 aa18.4■□□□□ 0.54
UBFD1-201ENST00000395878 ZNF512BQ96KM6 892 aaPredicted RBP18.4■□□□□ 0.54
UBFD1-201ENST00000395878 MLXIPLQ9NP71 852 aa18.4■□□□□ 0.54
UBFD1-201ENST00000395878 SENP1Q9P0U3 644 aa18.4■□□□□ 0.54
UBFD1-201ENST00000395878 TMEM247A6NEH6 219 aa18.39■□□□□ 0.54
UBFD1-201ENST00000395878 RHOBTB3O94955 611 aa18.39■□□□□ 0.54
UBFD1-201ENST00000395878 NCLNQ969V3 563 aa18.39■□□□□ 0.54
UBFD1-201ENST00000395878 KIFC3Q9BVG8 833 aa18.39■□□□□ 0.54
UBFD1-201ENST00000395878 ARHGDIAP52565 204 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 E2F4Q16254 413 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 ALKBH8Q96BT7 664 aaKnown RBP18.39■□□□□ 0.53
UBFD1-201ENST00000395878 EIF2AQ9BY44 585 aaKnown RBP18.39■□□□□ 0.53
UBFD1-201ENST00000395878 DCTN4Q9UJW0 460 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 KRT17Q04695 432 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 ZBTB17Q13105 803 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 CCNYL1Q8N7R7 359 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 ATL2Q8NHH9 583 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 SPATA33Q96N06 139 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 EPC1Q9H2F5 836 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 CFAP73A6NFT4 308 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 KITP10721 976 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 NMT1P30419 496 aaKnown RBP18.39■□□□□ 0.53
UBFD1-201ENST00000395878 YWHABP31946 246 aaKnown RBP18.39■□□□□ 0.53
UBFD1-201ENST00000395878 C2orf69Q8N8R5 385 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 STK33Q9BYT3 514 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 DHX35Q9H5Z1 703 aaKnown RBP18.39■□□□□ 0.53
UBFD1-201ENST00000395878 MTMR4Q9NYA4 1195 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 CDC42BPBQ9Y5S2 1711 aa18.39■□□□□ 0.53
UBFD1-201ENST00000395878 A8MXQ7 604 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 TBX3O15119 743 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 NCAPHQ15003 741 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 RASSF3Q86WH2 238 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 ZNF560Q96MR9 790 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 TRIM62Q9BVG3 475 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 AMACRQ9UHK6 382 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.38■□□□□ 0.53
UBFD1-201ENST00000395878 REREQ9P2R6 1566 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 ANKRD65E5RJM6 399 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 ZNF543Q08ER8 600 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 NAA30Q147X3 362 aaPredicted RBP18.38■□□□□ 0.53
UBFD1-201ENST00000395878 RNF219Q5W0B1 726 aaPredicted RBP18.38■□□□□ 0.53
UBFD1-201ENST00000395878 MMP19Q99542 508 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 SMYD3Q9H7B4 428 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 UVRAGQ9P2Y5 699 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 SCP2P22307 547 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 CDH6P55285 790 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 AP1B1Q10567 949 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 KCNV1Q6PIU1 500 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 RASGRP2Q7LDG7 609 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 CYP26A1O43174 497 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 IFNA8P32881 189 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 VSNL1P62760 191 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 NDE1Q9NXR1 346 aa18.38■□□□□ 0.53
UBFD1-201ENST00000395878 RNF17Q9BXT8 1623 aaKnown RBP18.38■□□□□ 0.53
UBFD1-201ENST00000395878 PDS5AQ29RF7 1337 aaKnown RBP18.38■□□□□ 0.53
UBFD1-201ENST00000395878 CCDC195A0A1B0GUA6 201 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 CNPY4Q8N129 248 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 APEX2Q9UBZ4 518 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 TUBE1Q9UJT0 475 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 CCDC22O60826 627 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 DIAPH2O60879 1101 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 ARSEP51690 589 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 CCZ1BP86790 482 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 CCZ1P86791 482 aaPredicted RBP18.37■□□□□ 0.53
UBFD1-201ENST00000395878 FMR1Q06787 632 aaKnown RBP eCLIP18.37■□□□□ 0.536e-7■■□□□ 13.9
UBFD1-201ENST00000395878 URGCPQ8TCY9 931 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 VIPAS39Q9H9C1 493 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 TSPOAP1O95153 1857 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 ADORA2BP29275 332 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 HSPA9P38646 679 aaKnown RBP18.37■□□□□ 0.53
UBFD1-201ENST00000395878 HABP4Q5JVS0 413 aaKnown RBP18.37■□□□□ 0.53
UBFD1-201ENST00000395878 ANGPTL8Q6UXH0 198 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 JPH1Q9HDC5 661 aaPredicted RBP18.37■□□□□ 0.53
UBFD1-201ENST00000395878 CRB1P82279 1406 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 MCF2P10911 925 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 SNX19Q92543 992 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 LRRC1Q9BTT6 524 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 POLR3CQ9BUI4 534 aaPredicted RBP18.37■□□□□ 0.53
UBFD1-201ENST00000395878 ETNK1Q9HBU6 452 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 KCND2Q9NZV8 630 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 APOL1O14791 398 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 E2F6O75461 281 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 AP2B1P63010 937 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 POU5F1BQ06416 359 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 CYFIP1Q7L576 1253 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 ECT2Q9H8V3 914 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 ZCCHC17Q9NP64 241 aaKnown RBP18.37■□□□□ 0.53
UBFD1-201ENST00000395878 HSPBP1Q9NZL4 362 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 RGL1Q9NZL6 768 aa18.37■□□□□ 0.53
UBFD1-201ENST00000395878 PXDNLA1KZ92 1463 aa18.36■□□□□ 0.53
UBFD1-201ENST00000395878 BYSLQ13895 437 aaKnown RBP18.36■□□□□ 0.53
UBFD1-201ENST00000395878 KRT33BQ14525 404 aa18.36■□□□□ 0.53
UBFD1-201ENST00000395878 NFIXQ14938 502 aa18.36■□□□□ 0.53
UBFD1-201ENST00000395878 HIF1AQ16665 826 aa18.36■□□□□ 0.53
UBFD1-201ENST00000395878 E4F1Q66K89 784 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms